| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0403 |
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| Symbol | |
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| ID | 4020869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 469502 |
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| End bp | 470158 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960588 |
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| Product | autoinducer (acylhomoserine lactone) synthase |
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| Protein accession | YP_567542 |
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| Protein GI | 91974883 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTC ATGTCGTGCG CCGCGAGAAC CGCGAAGCCT ACGCGGATCT GATCGAACGT
CAGTTTCGCA TCAGACACCA GATCTATGTC GTCGAGCGGA AATGGACCGA GCTCGACCGA
GCGGACGGCA GGGAGATCGA TCAGTTCGAC ACCGACGAGA CGGTGTACCT GATCGGCATG
CAGAACGGTG AGATCGTCGC CGGCATGCGG ATGGTGCCGA CCAGCTCGCC GACGCTGCTG
AGCGACATCT TTCCTCAGCT GTCGCTGGAC CGTCCGGTCC GGCGGCCCGA CGTCTACGAG
CTGTCCCGGA TCTATGTCGT TCCGAACAAG CGCGGCGAGC ACGCCGGTCC GCGCGCCGAA
GCGGTCATTC AGGCCGCCGC CATGGAATAC GGCCTGTCGA TCGGCCTGTC CGCTTTCACC
ATCGTGTTGG AGACGTGGTG GCTGCCGCGG CTGCTCGATC AGGGCTGGCG GGCGCGGCCG
CTTGGACTGC CGCAGGACAT CGACGGCATG TCGACCACCG CGGTGCTGGT CGACGTCGAC
GACGACGCCT GGCTCGAAAT CTGCGCCCGT CGATCAGTCC CCGGACCTGC ACTGCATTGG
CTGGGCCTCG AAAGCGTCAA TCGGAATCCA CTTCCCAACC CCATGGAGCT GGCATGA
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| Protein sequence | MEVHVVRREN REAYADLIER QFRIRHQIYV VERKWTELDR ADGREIDQFD TDETVYLIGM
QNGEIVAGMR MVPTSSPTLL SDIFPQLSLD RPVRRPDVYE LSRIYVVPNK RGEHAGPRAE
AVIQAAAMEY GLSIGLSAFT IVLETWWLPR LLDQGWRARP LGLPQDIDGM STTAVLVDVD
DDAWLEICAR RSVPGPALHW LGLESVNRNP LPNPMELA
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