Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0397 |
Symbol | |
ID | 4020863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 463569 |
End bp | 464726 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637960582 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_567536 |
Protein GI | 91974877 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCGCTG ATCCCGACAA GGCGTTCGGC GTCTACGTGC ACTGGCCGTT CTGCCTGTCG AAGTGCCCGT ATTGCGACTT CAACAGCCAC GTCCGCCACG CCGCGATCGA CGAGGCGCGA TTCGCCCGCG CCTTCGCCCG CGAGATTGCA GCCACTGCGG CGCGGATCGG TCCGCGTGAT GTCAGCTCGA TCTTTCTCGG CGGCGGCACG CCGTCGCTGA TGCAGCCCTC GACCGTCGGC GCGATCCTCG ACGCGATCGG CAAACATTGG CGCGTCACGC CCGATGCCGA AGTATCACTC GAAGCCAATC CGACCAGCGT CGAGGCGACG CGGTTTCGCG GCTATCGCGC CGCCGGCGTC AACCGCGTCT CGCTCGGCGT GCAGGCGCTC GACGACGCCT CGCTGAAGAC GCTCGGCCGG CTGCACACCG CGCAGGAGGC GATGGACGCG GTGGCGATCG CGCGCTCGGC TTTCGATCGT TATTCGTTCG ACCTGATCTA TGCACGTCCT GGACAAACGC CGGCGATGTG GGAGGCCGAG CTGCGCCGGG CGATCGGCGA GGCGGCCGAA CATCTGTCGC TCTATCAGCT CACCATCGAA GCCGAGACGC CGTTCTTTGC GCTGCATCGG GCGGGCAAAC TGCAGACACC GGACGAATCC GCGTCGCGCG CGCTCTACGA CGTCACGCAA TCGGTCTGCG CAGAGCTCGG ACTCCCTGCC TACGAGATTT CCAATCACGC CCGCCCGGGT GCCGAGTGCA AGCACAACCT CGTCTACTGG CGCGGCCAGG AATATGCCGG GATCGGACCC GGCGCGCATG GCCGGCTCGA CATCGGCGGC ACGCGCTACG CGATCGCCAC CGAAAAACGG CCGGAGAGCT GGATGATGCG GGTCGAAGCC ACCGGCACCG GCGTGATCAC TGACGACCGG CTGAACAGCG AAGAGCGCGC GGACGAATTC CTGCTGATGG GGCTGCGGCT CGCCGAGGGC ATCGACCCGC GGCGCTATCA GGCGCTGGCC GGCCGCTCGC TCGATCCGTC GCGGATCGCG CTGTTGTGCG CGGAAGGCGC CATCGTGGTC GACGCTGATG GTCGTCTGCG CGTGACCCAA GCCGGCTTCC CGGTGCTCGA CGCCGTGGTG GCGGATCTGG CGGCTTGA
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Protein sequence | MGADPDKAFG VYVHWPFCLS KCPYCDFNSH VRHAAIDEAR FARAFAREIA ATAARIGPRD VSSIFLGGGT PSLMQPSTVG AILDAIGKHW RVTPDAEVSL EANPTSVEAT RFRGYRAAGV NRVSLGVQAL DDASLKTLGR LHTAQEAMDA VAIARSAFDR YSFDLIYARP GQTPAMWEAE LRRAIGEAAE HLSLYQLTIE AETPFFALHR AGKLQTPDES ASRALYDVTQ SVCAELGLPA YEISNHARPG AECKHNLVYW RGQEYAGIGP GAHGRLDIGG TRYAIATEKR PESWMMRVEA TGTGVITDDR LNSEERADEF LLMGLRLAEG IDPRRYQALA GRSLDPSRIA LLCAEGAIVV DADGRLRVTQ AGFPVLDAVV ADLAA
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