Gene RPD_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0366 
Symbol 
ID4020832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp431739 
End bp432473 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID637960551 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_567505 
Protein GI91974846 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0042233 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCCTA CCGCCGACTT TAATCCCACC AGGGTCGCCA AATCGCTGCT GCGTCGGCGG 
CGAGAGGGCG CGCTCGCGAC CCTGCTGCGG GGCAGCGGTG GTCCGTTTTG CTCGCTGGTC
AACCTCGCGA CGGCTCCGGA CGGCGCGCCG ATACTTCTCA TCTCGCGTCT GGCGGTGCAC
ACCAAGAACC TGCTGGCCGA CCCGCGGATG TCGCTGATGC TCGACGAGCG CGCCGAGGGC
GACCCCCTGG AGGGCGCCCG GATCATGCTG CTCGGAACCG CCCTCGAAGC CCGGCCTGCC
GACGTTCAGC TGCTGCGCAG GCGGTATCTG GCTGCCCATC CGGGAGCCGA GGCCTATATC
GATTTCACCG ATTTCTCGCT GTTCACGATC GAGACCAGCG CCGCCCATCT GGTCGCGGGC
TTCGGCCGCA TCGTCGATCT GGCGCCGGCC GACTTTCTCA CCGACCTCGG CGGCGCTGCG
GGGCTGCTGG ATGCCGAGCC GTCCGCCGTC GACCATATGA ACGTCGATCA TCTGGACACG
CTGAATCTTT ATGCGACAAA ACTGATCGGG GCGGGCGCCG CCGATTGGCG CTGCACCGGG
GTCGATCCCG AGGGGCTCGA CCTTCAGGCC GGCCGAACGA CGCTGCGCCT GGACTTTCTG
GAACGGGTCA CCACGGCGGC GGGGCTGCGC GACATGCTGA AACGCATGGC AGACATCGCG
CGCAGCGCCG CATGA
 
Protein sequence
MQPTADFNPT RVAKSLLRRR REGALATLLR GSGGPFCSLV NLATAPDGAP ILLISRLAVH 
TKNLLADPRM SLMLDERAEG DPLEGARIML LGTALEARPA DVQLLRRRYL AAHPGAEAYI
DFTDFSLFTI ETSAAHLVAG FGRIVDLAPA DFLTDLGGAA GLLDAEPSAV DHMNVDHLDT
LNLYATKLIG AGAADWRCTG VDPEGLDLQA GRTTLRLDFL ERVTTAAGLR DMLKRMADIA
RSAA