| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0360 |
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| Symbol | |
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| ID | 4020826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 426165 |
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| End bp | 427064 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960545 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_567499 |
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| Protein GI | 91974840 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000866831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCGTG CAGCTACGCT ACCCGTTCTC AACGGTGAAT CCGGACTCGC TCGGTACCTC
GCGGAAATCC GCAAGTTCCC GATGCTCGAG CCCCAGCAGG AATACATGTT CGCCAAGCGC
TGGCGCGAAC ACGACGATCG CGACGCCGCG CATCATCTCG TCACCAGCCA TCTGCGGCTC
GTGGCCAAGA TCGCCATGGG CTATCGCGGC TATGGTCTGC CGATTTCCGA AGTTGTCTCG
GAAGGCAATG TCGGTCTGAT GCAGGCGGTG AAGCGGTTCG AGCCCGACAA GGGCTTCCGC
CTCGCCACCT ACGCGATGTG GTGGATCAAG GCGTCGATTC AAGAGTACAT TCTGCGTTCG
TGGTCGCTCG TGAAGATGGG CACCACCGCG AACCAGAAGA AGCTGTTCTT CAATCTGCGC
AAGGCCAAGA GCAAGATCTC GGCGCTGGAC GAGGGTGATA TGCACCCCGA CCAGGTCAAG
CTGATCGCCA CCCGCCTCGG CGTCACCGAG CAGGACGTGA TCGACATGAA CCGCCGCCTC
GGCGGCGACG CGTCGCTCAA CGCTCCGATC CGGGACGACG GCGAGCCCGG CGAATGGCAG
GACTGGCTGG TCGACCAGTC GCCGAGCCAG GAAGCCGTGA TGGCCGAGCA CGAAGAGCTC
GATCATCGCC GCGCCGCGCT GAACGGCGCG ATCGGCGTGC TCAACCCGCG CGAACGGCGC
ATCTTCGAGG CGCGCCGCCT CGCCGACGAG CCGATGACAC TGGAAGATCT CGCCGCCGAG
TTCGGCGTCT CGCGCGAGCG GGTGCGTCAG ATCGAGGTGC GCGCCTTCGA AAAGGTGCAG
AGCGCGGTGA AGGGCACCAT CGCGCGTCAG GAGCAGGCGG CTCTCGAGGC CGCCCACTGA
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| Protein sequence | MARAATLPVL NGESGLARYL AEIRKFPMLE PQQEYMFAKR WREHDDRDAA HHLVTSHLRL
VAKIAMGYRG YGLPISEVVS EGNVGLMQAV KRFEPDKGFR LATYAMWWIK ASIQEYILRS
WSLVKMGTTA NQKKLFFNLR KAKSKISALD EGDMHPDQVK LIATRLGVTE QDVIDMNRRL
GGDASLNAPI RDDGEPGEWQ DWLVDQSPSQ EAVMAEHEEL DHRRAALNGA IGVLNPRERR
IFEARRLADE PMTLEDLAAE FGVSRERVRQ IEVRAFEKVQ SAVKGTIARQ EQAALEAAH
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