| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0358 |
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| Symbol | |
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| ID | 4020823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 423299 |
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| End bp | 424021 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637960542 |
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| Product | regulatory protein, TetR |
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| Protein accession | YP_567497 |
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| Protein GI | 91974838 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000667156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGAGC CGCCGGCCAG AAACCGCAGT AATGTGTCCG CCCGAATCGA TGTAAGCTTG
ATCGCAATGA CGAAGAACTC GGCCGACAGC GCGCGTCCTC GCGGGCTTGT TCAGGTTAGA
TCCTCACGCG CGGACAAACA GGAACGAACG CGGCGCGCGC TCCTGCAAGC CGCGATCGAT
ATTGTGGGCG ATGAGGGATA TGCGGCGGCG ACTGTCGGCA AGATCACCAG CCGGGCCAAA
GTGGCGAACG GCACCTTCTA TAACTACTTC GATAGTCAGC AGAGTATTTT CGATCAGCTC
CTGCCCTTTT TGGGCGACCG GTTGACCGCA CATATCAAGG CGCAGGTGGA CGAGTCCCTA
ACGGGCGTCG CGCGTGACCG CGCACGTTTC GTCGCCTATT TCGATTTCTG TCGTAAGAAT
CCCGCATTTC TTCGTGTCTT GAATGAAGCG GAGGTGTTCG CCGCGACCGC TTACCGACAG
CACGTCGTGG CGATGTATGA AGGCTATCTT CACGCGCTGG AGCGCAGCGC CGCCAAGCAT
GAGATCACGG GTTACGACCG TGAAGAACTG CCGCCCGTGG TGTTCATGCT GATGGGCATT
CGAAGCTATA TGACCATGCT CTATCAGCAC AATTACGTCG AGCGTTCCGC GCTCTCGATA
GAAGCAATGG CTGATATCTA CGAAAAGCTC TTGACCCTCG GGCTCTTCAA CGACCGACGT
TAG
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| Protein sequence | MPEPPARNRS NVSARIDVSL IAMTKNSADS ARPRGLVQVR SSRADKQERT RRALLQAAID
IVGDEGYAAA TVGKITSRAK VANGTFYNYF DSQQSIFDQL LPFLGDRLTA HIKAQVDESL
TGVARDRARF VAYFDFCRKN PAFLRVLNEA EVFAATAYRQ HVVAMYEGYL HALERSAAKH
EITGYDREEL PPVVFMLMGI RSYMTMLYQH NYVERSALSI EAMADIYEKL LTLGLFNDRR
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