| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0353 |
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| Symbol | |
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| ID | 4020818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 417000 |
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| End bp | 418610 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637960537 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_567492 |
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| Protein GI | 91974833 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000011697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGGACG CAGAGGATAT CAAGCTCGCG ACCATCTCCG ATCAGGCGAC CAATCTCGCG
CGGCGGGTGA ATGTCGGTGA CATCACAAGA CGAGGTGCGC GCCGTCATCG CGACAAGATC
GCCGTTATCA TGGGCGAGAC CCGTCTCACA TACGGCGAAC TGGACGCTCG GGCGAACCGC
ATCGCGCATG GATTGCTGGC GATGGGCTTG GGCAACGGGG CCCGCATCGG CGGCCTCGCC
CGAAACTCGA TCGACTTCCT GACATTGTAC TTTGCAGCAG CAAAGGCTGG CGCGATCTTC
TGCCCGTCCA ATCCAGCAAT TCCTGACGCG GATCTCGTTC ATATCCTTGG TCATGCCGAG
GTTTCGGCAA TCTTCATCGA TCCTGACCGG CACCAGCAAT TCACCGCTGT CGCATCCCAG
GTGCCTTCCA TCAGAAAGAT ATTCTCCGTC GGCGGCAACG GGCAGGCAGA TTCGCAGCTC
GACTCGCTGG CGGTGATCGC CGAAGGGCAA CCTGCAATCG ATCCGGAGAC CGCGACAGGC
GATCGTGATG TCGCCATGAT CATGTACACC AGCGGAACGA CCTCCGCCCC CAAGGGAGCG
ATGTTGTCGC ACATCAACGT GACAACTGGC GCCGTGCACA ATGCGTTCGC GGGCGAGGTC
GACGAGAACA CCATCGCAAC CGCCATACTA CCCTTGTTTC ATTGCGGTCA GCTATCAATC
AGCAGCGGAA CGTTGATGCG TGGAGGCACC GTCGTCGTTT TCGACGGGTT CGAACCCGCA
GCCCTCCTGG ACGCGATCGC GCGCGAACGC ATCACCTGGC TATTCGCTCT TCCCGCGATG
TATCGCGCCC TCCTGGCGCA TAAGGATCTC GACAACACGG ACGTGTCGAG TCTCGCATTC
TGTTTGTATG CGATGGCTCC GATGGATCCT TCGACGCTGC GCGAAGCGTC GCGCAGGCTC
AAGGCTCGCT TCGCACTCAC CAGCGGACAG ACGGAAGCCT ATCCGCCGAC GGTTGTATTC
GCTCCGGAAT TTCAGTTGAC CAAGCACGGC GCCTTTTGGG GGCGCGCCAT GCCCTTGGTC
GATTTGGCAA TCATGGACGA CGATGGGCGC CTGGTCGAGG ACGGATCCGT CGGCGAAATC
GTCTATCGAG GTCCGATGGT CATGGAAGGG TATCTGAAAG ATCCGGAAGC CACAGCTCGG
GCGTTCGAGG GCGGTTGGTT TCACTCCGGC GATCTCGGGC GCTTCGACGA AGACTCGCTG
CTCCTCTTCG TCGACCGCAA GAAGGATATC ATCAAGTCGG GCGGAGAAAA CGTCTCATCC
GTCAAGGTGG AGAGCTGTCT CCTTGCCCAC CCGGCGGTGC GGGCTGCGGC GATTGTCGGC
GTGCCTCACA GCCGTTGGAG CGAGGCCGTT GTCGCTGCTG TTTGCCTGCT TCCGGGTTCA
GTGGAAGACG AAGGGCAATT GATCGCCCAT TGTAAACAGA CACTCGCACC CTTCGAAGTC
CCGAAGAAGA TTGTCTTCTA CCGTGAGCTT CCCCAGACAG CGACCGGAAA GCTCCAGAAA
TATCAGATCC GGGGCGAGCT CGAAAACCTG TTTCGCGACC AGACGAACTG A
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| Protein sequence | MSDAEDIKLA TISDQATNLA RRVNVGDITR RGARRHRDKI AVIMGETRLT YGELDARANR
IAHGLLAMGL GNGARIGGLA RNSIDFLTLY FAAAKAGAIF CPSNPAIPDA DLVHILGHAE
VSAIFIDPDR HQQFTAVASQ VPSIRKIFSV GGNGQADSQL DSLAVIAEGQ PAIDPETATG
DRDVAMIMYT SGTTSAPKGA MLSHINVTTG AVHNAFAGEV DENTIATAIL PLFHCGQLSI
SSGTLMRGGT VVVFDGFEPA ALLDAIARER ITWLFALPAM YRALLAHKDL DNTDVSSLAF
CLYAMAPMDP STLREASRRL KARFALTSGQ TEAYPPTVVF APEFQLTKHG AFWGRAMPLV
DLAIMDDDGR LVEDGSVGEI VYRGPMVMEG YLKDPEATAR AFEGGWFHSG DLGRFDEDSL
LLFVDRKKDI IKSGGENVSS VKVESCLLAH PAVRAAAIVG VPHSRWSEAV VAAVCLLPGS
VEDEGQLIAH CKQTLAPFEV PKKIVFYREL PQTATGKLQK YQIRGELENL FRDQTN
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