| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0352 |
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| Symbol | |
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| ID | 4020817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 416057 |
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| End bp | 416791 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960536 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_567491 |
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| Protein GI | 91974832 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000616439 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCCC CAGTCGTCGT TATCACGGGC GCAGCCCGAG GAATCGGATC GGCCGCGGCG
TCCACCTTCC TGGACCATGG CTGGCGGGTT CATGGCCTCG ACCGACGCGC GCCATTGATC
AAGGGAGCTA TCGGCCACGA ATGCGACGTG ACCAGCGAAG AGCAGCTCCT TTCCGTGGCG
GAACGAATCG GCCCTATCGA CGCGTTGGTG CCTGGCGCCG GCATCAATCT GCGTCCGCAT
GACAATGCTG CGGAAAAGCT GACTTTGGAG GCCTGGAATC GCACCATTGC CGTGAACCTC
ACGGGCGTGA TGCTGACGGT CCGCGCGTTT CGACCCAGGA TACGTGCCGA CGGCGCGATC
GTTCTCATCA GCAGCGTCGC AGCATTGCGT GCGATGCCCC ACTCGGATGC TTATACGGCC
AGCAAAGGCG CGATTGTCGC GCTCACCAGA AGCTGGGCCG TCGATTACAG CCGGGATGGT
ATACGGGTGA ACTGTGTGGC GCCGGGGCCT ACCGATACCG AGATGATGTC CGGGCTCCGC
GATGGATACG CTGTCGAGCG ACAGGTGCAG CTTCCTCAGC AACGCATGGC GACTGCGGGC
GAAGTTGCGC AAGTCATCCG TTTCCTTGCA TCCGACCAGG CTTCCTACGT GTCCGGCGCC
ATCGTCCCTG TCGATGGCGG CGCCGTCGCG CACAGCGCGG GCGTTCCATT TCCGCGGAGA
CGTCCCAAAC CATAG
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| Protein sequence | MSAPVVVITG AARGIGSAAA STFLDHGWRV HGLDRRAPLI KGAIGHECDV TSEEQLLSVA
ERIGPIDALV PGAGINLRPH DNAAEKLTLE AWNRTIAVNL TGVMLTVRAF RPRIRADGAI
VLISSVAALR AMPHSDAYTA SKGAIVALTR SWAVDYSRDG IRVNCVAPGP TDTEMMSGLR
DGYAVERQVQ LPQQRMATAG EVAQVIRFLA SDQASYVSGA IVPVDGGAVA HSAGVPFPRR
RPKP
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