Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0338 |
Symbol | |
ID | 4020798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 392283 |
End bp | 393380 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960517 |
Product | hypothetical protein |
Protein accession | YP_567477 |
Protein GI | 91974818 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.88474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.474349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCT CGGAGAACAG GTTCTTCATC TTGCTGCTGT TGGTAGCCTC GATCGGCTTC GGCTGGATCT TGCTGCCGCT TTACAGCGCA GTGCTGTGGG GCGTGGTGAT CGCGATCCTG TTCGCGCCGC TGTACCGGCA ACTGAACCGC GCGTTCGGCT TCCGCCGCAA TCTGGCCGCG CTGACGACGG TCGCGATCAT CGTCACCATG GTGATCCTTC CGATCTCGCT GATCGGCGCG GCGCTGGCGC AGGAAGCCCG GGCGATGTTC CTCCGGATCG AGTCCGGCAA TCTGGACATG CTTCAGTATC TCAAACAGGT TCTGGCGGAG CCGCCGGCCT GGATCAGCGG GGTGCTGGAG CGATTCAGCA TCGGCAACCT CTCCGACCTT CAGGAACGGC TTTCCGCCGT GTTGATGCGC GGCAGTCAGT ATCTCGCGGG ACAGGCCATC GGCATCGGTC AGGGAACGGT CGAGATCGTC ATCAACCTGG GCGTGATGGT CTATCTGCTG TTCTTCCTGC TCCGCGACGG CGATCTGCTG GCGGCGCGTA TCCGGAGGGC CGTGCCGCTG TCGGTCGAGC AGGAAAGCCA GTTGCTGCGC AAGTTCACGG TCGTGATCCG CGCGACCGTC AAGGGCAACA TGCTGATCGC GCTGATCCAG GGCGCGCTCG GCGGCGTGAT GTTCTATATC CTCGGCGTCA ACGGCGCGCT GCTGTGGGGC GTGGTGATGG CGTTCCTGTC GCTGCTGCCC GCGGTCGGCG CCGGTCTGGT CTGGCTGCCG GTGGCGCTCT ATTTGCTCGG CACCGGATCG ATCTGGCAGG GCGTTGCGCT GATCGCCTTC GGCACGATGG TGATCGGCAC GGTCGACAAC GTGCTGCGTC CGGTGCTGGT CGGCAAGGAC ACGCGGATGC CGGACTACGT CGTGCTGATC TCGACGCTCG GCGGCATCCA GGTTTTTGGC CTCAACGGCT TCGTCATCGG GCCGGTGATC GCGGCGATCT TCATCGCGGC CTGGGATATC TACTCCGCCT CGCGGGAAGC CGCGGCGGGG ATCGGCGAAA CGACCACCGG TGGCGTGCCG ACCAGCGATG CGCCATGA
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Protein sequence | MRASENRFFI LLLLVASIGF GWILLPLYSA VLWGVVIAIL FAPLYRQLNR AFGFRRNLAA LTTVAIIVTM VILPISLIGA ALAQEARAMF LRIESGNLDM LQYLKQVLAE PPAWISGVLE RFSIGNLSDL QERLSAVLMR GSQYLAGQAI GIGQGTVEIV INLGVMVYLL FFLLRDGDLL AARIRRAVPL SVEQESQLLR KFTVVIRATV KGNMLIALIQ GALGGVMFYI LGVNGALLWG VVMAFLSLLP AVGAGLVWLP VALYLLGTGS IWQGVALIAF GTMVIGTVDN VLRPVLVGKD TRMPDYVVLI STLGGIQVFG LNGFVIGPVI AAIFIAAWDI YSASREAAAG IGETTTGGVP TSDAP
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