| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0302 |
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| Symbol | |
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| ID | 4020761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 349371 |
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| End bp | 351848 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637960480 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_567441 |
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| Protein GI | 91974782 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.204863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTGT CCCGCTCCTT CGACACGCCC CTTCCGATCG ACGACGCGCT CGCCGACCTC
ACCTCCGCGC TCGCGGGGAA CAGCACGGCC GTGCTGGTTG CGCCGCCGGG CGCCGGCAAG
ACCACGCGGG TGCCGCTGGC GCTGCTCGAC CAGCCGTGGC TCGGGACCAA AAAGATCATC
ATGCTGGAGC CGCGGCGGAT CGCGGCGCGC GCCAGCGCCG AACGGATGGC GAAGACATTG
GGCGAGAGAG CCGGCGAGAC CGTCGGCTAT CGTGTCCGGT TCGGCTCGAA AATCTCTCGT
GCGACACGGA TCGAGGTGGT CACCGAGGGC ATCTTCACCC GGCAGATCCT CGACGATCCA
GAGCTCGCCG GAATCGGCGC GGTGCTGTTC GACGAGTTTC ACGAGCGCTC GCTCGACGCC
GATCTCGGCC TCGCTTTGGC GCGCGATGCG CAGCAGGGCC TGCGCGAGGA TCTGCGCATC
CTGGTGATGT CGGCGACGAT CGACGGCGCA CGGGTCGCAA GGCTGCTCGG CGACGCCCCC
GTGGTCGAAA GCCTCGGCCG GGCGTTCCCG GTCGAGACCC GCTATCTCGG CCGCCGATCC
GACGCGCCGA TGGAGCGCCA GATGGCCGAG GCGATTGCAG CGGCGTTGCG CAGCGATGCC
GGTTCGGTGC TGGCGTTTCT TCCGGGTGCG GCCGAAATCC GCCGCACCGA GACGATGCTG
CGCGAACGCG TCCACGATGC CGCGATCGAG ATCGTGCCGC TGTTCGGCGC GCTCGACGCA
GCCGTGCAGG ACCGCGCGAT CCAGCCGGCG CCCAAGGGTA GCCGCAAGGT GGTGCTGGCG
ACCTCGATCG CCGAGACCTC GCTGACGATC GAAGGCGTGC GCATCGTGGT CGATTGCGGG
CTGTCGCGGG TGCCGCGCTA CGAGCCCGAC ATCGGGCTGA CCCGTCTCGA GACGGTGCGG
GCCTCGCGCG CCGCGGTCGA TCAGCGCCGC GGCCGCGCCG GCCGGATCGA GCCCGGCGTT
TGCTACCGGC TGTGGGACGA GCCGCAGACC GCGTCGCTGC CGGCCTATAC CCAGCCCGAA
ATCCTCAGCG CCGACCTGAC CTCGCTGCTG CTCGACCTGG CGCAATGGGG CGTGACCGAC
CCGGCGACGC TGGCGTTTCT CGATCCGCCG CCGGGGCCGG CGCTGAAGGA AGCGCGTGAA
TTGCTCGCCG AACTCGGCGC GCTCGATGCC GACGGACGCA TCACCGACGA AGGCCGCGCC
CTGCGTGCGA TGGCGCTGCC GCCGCGGCTG GCGCGGATGA TCGTCGACGC GGCGCGGCTC
GACCATGGCG AGGAGGCGGC CGAGATCGCC GCGATCCTCA CCGAGCGCGG CCTCGGCGGC
GACAGCGTCG ATCTCGATCA CCGCCGCGAT CAATTCCGCC GCGACCGCTC GCAACGCGCG
ATGAGCGCGC GACAGATGGC GCAGCGCTGG GCCGGGCAGG CTTCTTCTCC CTCCCCGCAA
GGCGGAGAGG AGTTATCGAC CGGCGTGCTG CTCGCCTTCG CGTTCCCCGA TCGCGTCGCC
AAGAATCGCG GCAATGGCTC GTTCGTGCTC GCCAATGGCC GTGGCGCTGC GATCGAACAA
ACCTCCGCGC TGGCGCGCGC GCCGTACCTG GCGGTAGCGG AGCTGACCGG CACCGCGGCG
CAGGGGCGCA TTCTGCTGGC CGCGCCGATC ACGCTGGCCG AGATCGAGCA GCATTTCGCC
GGCCAGATCA CCGATGCCGA CGACGTCAGC TTCGATCGTG CCGCGATGGC GCTGCGGGCG
CGTCGGCGGC GCGCGCTCCA CGCGATCACT CTGTCGGAAG CGCCGCAGGC GCTGACGCCG
TCGGCCGAGA CCGCGCAGGT GCTGGCCGAC GGGCTGATCG CGGCGGGTCT CGATCGACTG
CCGTGGTCGA AGCAGCTTCA GCAATGGCGC GGCCGGGTGA TGTTCCTGCG CAAGGCCGAA
GGCGAGCCTT GGCCCGACCT GAGTGACTCT GCGCTCGCCG AGCAGCGCGA GGATTGGCTG
GTGCCGGCGT TGTTCGACAA GGCCGGGCTG AAGGACGTCT CTGCCGGCGA TCTGTCGGAT
GCGCTGATGA ACCTGCTGCC GTGGGATCTG CGCGCGCGGC TGGATCGCGA GGCGCCGACC
CATTTCGAGG CGCCGACCGG CTCGCGCCTG CCGATCGACT ATGAGGCCGA GCAGGGCCCG
ACCATCGCGG TCAGGCTGCA GGAATTGTTC GGGCTGACGT CGCACCCGTC GGTGGCGGGC
GGCGCGGTGC CGCTGGTGCT GGAACTGCTG TCGCCGGCGC ATCGTCCGGT GCAGGTCACG
CGCGATCTGC CGGGCTTTTG GCGCGGCTCC TATGCCGCCG TGCGCGCCGA TCTGCGCGGC
CGCTATCCGC GCCATCCCTG GCCGGAAGAC CCGGCCGGCG CACCGCCGAC CCGTCGCGCC
AAGCCGAAAG GCACCTGA
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| Protein sequence | MHLSRSFDTP LPIDDALADL TSALAGNSTA VLVAPPGAGK TTRVPLALLD QPWLGTKKII
MLEPRRIAAR ASAERMAKTL GERAGETVGY RVRFGSKISR ATRIEVVTEG IFTRQILDDP
ELAGIGAVLF DEFHERSLDA DLGLALARDA QQGLREDLRI LVMSATIDGA RVARLLGDAP
VVESLGRAFP VETRYLGRRS DAPMERQMAE AIAAALRSDA GSVLAFLPGA AEIRRTETML
RERVHDAAIE IVPLFGALDA AVQDRAIQPA PKGSRKVVLA TSIAETSLTI EGVRIVVDCG
LSRVPRYEPD IGLTRLETVR ASRAAVDQRR GRAGRIEPGV CYRLWDEPQT ASLPAYTQPE
ILSADLTSLL LDLAQWGVTD PATLAFLDPP PGPALKEARE LLAELGALDA DGRITDEGRA
LRAMALPPRL ARMIVDAARL DHGEEAAEIA AILTERGLGG DSVDLDHRRD QFRRDRSQRA
MSARQMAQRW AGQASSPSPQ GGEELSTGVL LAFAFPDRVA KNRGNGSFVL ANGRGAAIEQ
TSALARAPYL AVAELTGTAA QGRILLAAPI TLAEIEQHFA GQITDADDVS FDRAAMALRA
RRRRALHAIT LSEAPQALTP SAETAQVLAD GLIAAGLDRL PWSKQLQQWR GRVMFLRKAE
GEPWPDLSDS ALAEQREDWL VPALFDKAGL KDVSAGDLSD ALMNLLPWDL RARLDREAPT
HFEAPTGSRL PIDYEAEQGP TIAVRLQELF GLTSHPSVAG GAVPLVLELL SPAHRPVQVT
RDLPGFWRGS YAAVRADLRG RYPRHPWPED PAGAPPTRRA KPKGT
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