| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0278 |
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| Symbol | |
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| ID | 4020737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 319035 |
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| End bp | 320333 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960458 |
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| Product | transcription factor CarD |
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| Protein accession | YP_567419 |
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| Protein GI | 91974760 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.197745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTATA TTTGGCACAT TCTAGAAACT CGGCACGCCG TTTTCGCGGC CGGGAAGGGG
TCCCGTCAAA AACAACGAAC AGGGGCGTGG CGATTCCACG CGCAGGCTGT GTCACAGAAA
ACGCGTAAAA TGAGTGTTTC TTCGAAGCGT GCCAAGCATG CCGCTGCGGC AAACCGCAGC
GCGACCAAGA GCCAGTCTCG AATTTCTGCC AAGGACACCC GGAGCGTCAA GTCCCCTGCT
TCCAAGGCCT CCGGTTCAAA GGCCTCGTCT TCCAAGAGCC CCGTTTCCAA AGCCTCCGCT
ACGAAGGCCT CCGCTACGAA GGCCGTTGGT TCGAAGTCGT CAGTGTCCAA GGCCTCCGCA
TCCAAGGCCT CTACGTCGAA GGCCTCTGCC GGCAAGGCCG CCGCTGCGAA GGTGACTGCC
GGGAAGGCAA GCGCCGCCAA GGTTACAACC GCTAAGGGCT CTGCCGCGAA GGCTTCGGCC
TCCAAGGCAT CGGCCCTCAA GTCCTCGAAA AACAAAAGAA GTGAAATGCC ATCCAAGACT
GCGAAAACTG CCGCTCCGGC GGACGCTTCC AAGACCGCTT CGGCCAAGTC GACGGCGAAG
CCGGTAGCCA AGGCTCCTGA GGCGCCGAAG GCGGCTGTCG CGAAGCCGGA AGGCAAGCCC
GTGGCTGCCA AGCCGGCGGC GCCGCCGAAG GTCGAGGAGC CGAAGAAGGC CGTGACCCAG
CGTCAGGGCT TCAAGGCGGG CGAATTCGTG GTCTATCCGG CCCATGGCGT CGGCCAGATT
CTGGCGATCG AGGAGCAGGA AATCGCGGGC GCCAAGCTCG AACTGTTCGT CATCAACTTC
ATCAAGGACA AGATGACGTT GCGGGTGCCG ACCGCCAAGG TCGCCAATGT CGGGATGCGC
AAGCTGTCCG ATCCGGCGCT GGTGAAGAAG GCGCTCGAGA CCCTGAAGGG CCGCGCCCGC
GTCAAGCGGA CGATGTGGTC GCGCCGCGCC CAGGAATACG AAGCCAAGAT CAATTCCGGC
GATATCGTCG CGATCGCCGA AGTGGTGCGT GACCTGTTCC GTTCGGAATC CCAGCCCGAG
CAGTCCTACA GCGAACGCCA GCTGTATGAA GCGGCGCTCG ATCGGCTGTC GCGCGAAATC
GCTGTGGTTC AGCAGGTCAC CGAGACCGAA GCGGTCAAGG AAGTCGAGGG CCAGCTCGCC
AAGAGCCCGC GTCGCGGCGC CAAGGCCGAG GTGGACGCTG AAGGCGATGC CGATGGCGAT
GTCGACACCG ACGATGCGGT GACCGACGAA GCGGCCTGA
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| Protein sequence | MCYIWHILET RHAVFAAGKG SRQKQRTGAW RFHAQAVSQK TRKMSVSSKR AKHAAAANRS
ATKSQSRISA KDTRSVKSPA SKASGSKASS SKSPVSKASA TKASATKAVG SKSSVSKASA
SKASTSKASA GKAAAAKVTA GKASAAKVTT AKGSAAKASA SKASALKSSK NKRSEMPSKT
AKTAAPADAS KTASAKSTAK PVAKAPEAPK AAVAKPEGKP VAAKPAAPPK VEEPKKAVTQ
RQGFKAGEFV VYPAHGVGQI LAIEEQEIAG AKLELFVINF IKDKMTLRVP TAKVANVGMR
KLSDPALVKK ALETLKGRAR VKRTMWSRRA QEYEAKINSG DIVAIAEVVR DLFRSESQPE
QSYSERQLYE AALDRLSREI AVVQQVTETE AVKEVEGQLA KSPRRGAKAE VDAEGDADGD
VDTDDAVTDE AA
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