Gene RPD_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0247 
Symbol 
ID4020705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp284798 
End bp285364 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID637960426 
Productnitrogen-fixing NifU-like 
Protein accessionYP_567388 
Protein GI91974729 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCC AGACCGAACC CACGCCGAAT CCCGCCACCC TGAAGTTCAT TCCCGGCCGC 
GTCGTGCTCG ACAGCGGCAC GATGGAATTC ACCGACCGCA AGCAGGCGGC GCGCTCGCCT
CTGGCCGAAC GGCTGTTCGA GGTCGAAGGC GTCAGCGGGG TGTTCTACGG CAGCGATTTC
GTCACCGTCA CCAAGGACGG CGCCGGCGAC TGGCAGCACC TCAAGCCGGC GATCCTCGGC
GCGATCATGG AGCACTACAT GTCCGGCGCG CCGATCATGG CGGACGGACG GGTCGACGGC
GACGAGACCG ATGAGGACGA ATTCTTCGCC GAGCGCGACG CCGAGACGGT CGAGATCATC
AAGGATCTGA TCGAAACAAG GGTGCGCCCC GCGGTCGCCA ATGACGGCGG CGACATCACC
TTCCGCGGCT TCAAGGACGG CGTCGTCTAT CTGGCCATGA AGGGCGCATG TTCGGGCTGT
CCGTCGTCGA CCGCAACGCT GCAGCACGGC ATCCAGAACC TGCTGAAGCA CTTCGTGCCG
GAAGTGGTCG AAGTCCGCCC AGTCTGA
 
Protein sequence
MFIQTEPTPN PATLKFIPGR VVLDSGTMEF TDRKQAARSP LAERLFEVEG VSGVFYGSDF 
VTVTKDGAGD WQHLKPAILG AIMEHYMSGA PIMADGRVDG DETDEDEFFA ERDAETVEII
KDLIETRVRP AVANDGGDIT FRGFKDGVVY LAMKGACSGC PSSTATLQHG IQNLLKHFVP
EVVEVRPV