| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0242 |
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| Symbol | |
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| ID | 4020700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 280703 |
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| End bp | 282124 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960421 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_567383 |
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| Protein GI | 91974724 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCGC CGCGCAAGCT GCACATCAAG TCCTATGGTT GTCAGATGAA TGTCTACGAT
GCCCAGCGCA TGGTGGACGT GCTGGCGCCC GAGGGCTTTG TCGAGACCGC GACGGTGGAC
GACGCCGATC TGGTGATCCT CAACACCTGC CACATTCGCG AGAAGGCCTC CGAGAAGGTG
TATTCGGAGC TCGGCCGGCT GCGTCTGGCG CGCGACGAGG CGGCAAGTTC CGGCCGCCGG
ATGCAGATCG CGGTCGCCGG CTGCGTTGCG CAGGCGGAGG GCGAGGAGAT CGTCCGCCGC
GCCCCCGTGG TCGACGTCGT GGTCGGGCCG CAGAGCTATC ACCATCTGCC GCAGCTTCTG
GCGCGCGCCG ATCAGGCCGG CCGCGCGCTC GAAACCGAAT TTCCGGTCGA GGACAAATTC
GGCTTCCTGC CGCAGCCGCG GCCGGAAACC ATCCGCGCCC GCGGCATTTC GGCTTTCGTC
ACCGTGCAGG AGGGTTGCGA CAAGTTCTGC ACCTTCTGCG TGGTGCCCTA TACCCGCGGC
GCCGAAGTCT CGCGCCCGGT GTCGGCGATC ATCGACGACG TCAAGCGCCT CGCCGACAAC
GGCGTCCGCG AGATCACGCT GATCGGCCAG AACGTCAACG CCTATCATGG CGAGGGGCCG
GACAGCCGCG CCTGGACGCT CGGCCGCCTG CTGCGCCGGC TCGCCGCGGT GCCGGGCATT
GTCCGGCTGC GCTATTCCAC CAGCCATCCC AACGACGTCG ATGACGAACT GATCGAAGCG
CATCGCGACC TCGACGCGCT GATGCCGTTC GTGCATTTGC CGGTGCAGTC CGGATCGGAC
CCGATTCTGG CCGCCATGAA CCGCAAGCAC ACCGCCGCCG ATTATCGCCG GGTGATCGAC
CGGTTCCGCG CGGTGCGGCC GCAGATCGCC TTCTCATCGG ATTTTATCGT TGGGTTCCCG
GGCGAGACCG AGGCGGATTT CGCCGCCACC CTCGCACTGG TCACACAAAT CGGTTACGCT
GGCGCATATT CGTTCAAATA TTCGCCGCGG CCCGGCACGC CCGCGGCGGA CATGCAGGAG
ATGGTGCCCG CAGCGGTGAT GGATGAGCGT TTGGAGCGGC TCCAGCAATT GATCGACAGT
CAGCAATCGG CCTTCAACAA GGCGGCGATC GGCCAGACCG TGGATGTGCT GTTCGAGCGC
GCCGGCCGCA AGCCGGGCCA GATCGTCGGC CGCACCGCTT ATCTGCAGCC CGCCCACGTT
TTTCCAGGCC CGATGTTTCT AGGTCCCGGG ATGGCGCCCG ACAGCCTCGT CGGGCAGATC
CTCCCGGTCC GGGTCGACAG TCTCGAGCGT TACAGCCTGC TCGGCGAACT GGCGGCCAAG
CCGCCGCAGC ATGCTCGTCC TTTGGCCGCC ACTGGAGCCT GA
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| Protein sequence | MAPPRKLHIK SYGCQMNVYD AQRMVDVLAP EGFVETATVD DADLVILNTC HIREKASEKV
YSELGRLRLA RDEAASSGRR MQIAVAGCVA QAEGEEIVRR APVVDVVVGP QSYHHLPQLL
ARADQAGRAL ETEFPVEDKF GFLPQPRPET IRARGISAFV TVQEGCDKFC TFCVVPYTRG
AEVSRPVSAI IDDVKRLADN GVREITLIGQ NVNAYHGEGP DSRAWTLGRL LRRLAAVPGI
VRLRYSTSHP NDVDDELIEA HRDLDALMPF VHLPVQSGSD PILAAMNRKH TAADYRRVID
RFRAVRPQIA FSSDFIVGFP GETEADFAAT LALVTQIGYA GAYSFKYSPR PGTPAADMQE
MVPAAVMDER LERLQQLIDS QQSAFNKAAI GQTVDVLFER AGRKPGQIVG RTAYLQPAHV
FPGPMFLGPG MAPDSLVGQI LPVRVDSLER YSLLGELAAK PPQHARPLAA TGA
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