Gene RPD_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0234 
Symbol 
ID4020692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp272520 
End bp273308 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID637960413 
Producthypothetical protein 
Protein accessionYP_567375 
Protein GI91974716 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGATCGCAGA TCCCGTCGTC CCCGATACGC TTGCCGAGCC GCGCCTGGTG 
GTCGAGCCCG GCGTTGCTGC GCGTTTCGCC GCGGTCGCAG AGCCCGTGCT GCAGGCGATG
GGCTACCGGC TGGTGCGCAT CAAAGTATCG GGCGAGGCCG GCTGCACCGT GCAGATCATG
GCCGAGCGGC CCGACGGCAC CATGCTGATC GACGATTGCG AGGCAGTCTC GCGGGCGCTG
TCGCCGGTGC TCGACGTCAC CGATCCGATC GACCGCGCTT ATCGGCTGGA GATTTCGTCG
CCCGGGATCG ACCGGCCGCT GGTCCGCAGC TCGGATTTCG CCCGCTACAG CGGCCATCTG
GTCAAGATCG AGATGGCGGT TCCGCATCAG GGCCGCAAGC GCTATCGCGG CCTGCTGGAC
GGCGTCGAGG GCGATGCGAT CCGCATCCAG CGCGAGGGTG TGACCAAGGA CGAAGACCCG
CTGGTGCTGC TGCCGATGCA CGACATCGGC GACGCGCGGC TGGTGCTGAC CGATGAATTG
GTCGCGGAAT CGATGCGCCG CGGCAAGCAG GCCGAACGCG AGCTGAAGCA GAGCCTCGGG
CTCGCCCCGC CGCCGCCGCC GCACGCCAAG CGCAGCGATC CGAAAAAGAG CAGCGCGCCG
AAGCCCAAGC CGCTGACAAA GCCGGTGGTC AAGCCGGACG CCAAGCCCAA GCCGAAGAAC
ACCAAGCAAC ACCGTCTCGC CGCCGACAGG TTGCGGCGTG GCGACACCGA CCTGTCCGAG
GGAGACTGA
 
Protein sequence
MTDPIADPVV PDTLAEPRLV VEPGVAARFA AVAEPVLQAM GYRLVRIKVS GEAGCTVQIM 
AERPDGTMLI DDCEAVSRAL SPVLDVTDPI DRAYRLEISS PGIDRPLVRS SDFARYSGHL
VKIEMAVPHQ GRKRYRGLLD GVEGDAIRIQ REGVTKDEDP LVLLPMHDIG DARLVLTDEL
VAESMRRGKQ AERELKQSLG LAPPPPPHAK RSDPKKSSAP KPKPLTKPVV KPDAKPKPKN
TKQHRLAADR LRRGDTDLSE GD