Gene RPD_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0224 
Symbol 
ID4020682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp257482 
End bp258420 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID637960403 
ProductLysR family transcriptional regulator 
Protein accessionYP_567365 
Protein GI91974706 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.280069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCC TCCGACAGCT CCGCTACCTC TCCGCCCTCG CCCGCCACGG CCATTTCGGC 
CGCGCCGCCG AATCCTGCGC GGTGACCCAG CCGGCGCTGT CGATGCAGAT CGCCGAATTG
GAGCGGACGC TGGGGGTGAA AGTGGTGGAA CGCCGCCCCG GCGAGGTGTT TTTGACCGAA
ATCGGCCGGG AAATCGCCCG CCGCGGCGAC GATCTGCTGA CCGCGTCGCG CGATCTGGTC
GATTTCGCCC GCCACCGCGC CCAGCCGCTG ACCGGCCGAC TGACGCTCGG CGTGATCCCG
TCGCTGGCGC CCTATCTGCT GCCGAAGGTG CTGCCGCTGC TGCAGCGGCG TTTTCCCGAG
CTGCGACTGG AGCTGCGCGA GAGCCAGACG CGGCAACTGG TCACGGACAT CGGCAGCGGC
GCGCTCGACG CCGCGCTGCT GGCGCTGCCG GCCGGCAACC GCGACCTCGA CGCGATCGCG
CTGTTCGACG ACGTCTTCCT GCTGGCGGTG CCGGCCGACG ATCCGCGGCC GGAGAGCGCG
ACGGTGACGG TCGACGAGAT CGACCAGTCG CGGCTGATCC TGCTCGAGGA CGGCCATTGC
CTGCGCGACC AGGCGCTGGC GTTCTGCGCC ACCGGGCGCA ATCGCGCGAT CAATCTGGGC
GGCGCCGGCA CCGCGACGTT CGGCGCCTCG AGTCTCACCA CGGTGATCCA GATGGTCGCC
GCCGGCTACG GCGTGACGTT GATCCCGCAG ATCGCCGCCG AGATCGAACG ACGCGATGCG
AGAGTGAAGT TCCTGCAACT GCGACGGCCA CAACCCGGCC GCAGCATCGG GCTGGCGTTC
CGCAAGACCT CGCCACGCCG CAGTGACTTC GAGGCGCTCG GCGACGTCGT GACGGAAGGA
GTGAGCGGCA AGGCGGCCAG GGAGGAAGCG TCGGCGTGA
 
Protein sequence
MVTLRQLRYL SALARHGHFG RAAESCAVTQ PALSMQIAEL ERTLGVKVVE RRPGEVFLTE 
IGREIARRGD DLLTASRDLV DFARHRAQPL TGRLTLGVIP SLAPYLLPKV LPLLQRRFPE
LRLELRESQT RQLVTDIGSG ALDAALLALP AGNRDLDAIA LFDDVFLLAV PADDPRPESA
TVTVDEIDQS RLILLEDGHC LRDQALAFCA TGRNRAINLG GAGTATFGAS SLTTVIQMVA
AGYGVTLIPQ IAAEIERRDA RVKFLQLRRP QPGRSIGLAF RKTSPRRSDF EALGDVVTEG
VSGKAAREEA SA