| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0221 |
|---|
| Symbol | |
|---|
| ID | 4020679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 252427 |
|---|
| End bp | 253653 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637960400 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
|---|
| Protein accession | YP_567362 |
|---|
| Protein GI | 91974703 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.188438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGG TTGTTGTCAC GGGGATGGGT ATCGTCTCAT CGATCGGAAA CAACACACAG
GAGGTGCTGG CGAGTCTGCA CGACGCCAAG TCGGGCATCT CGCGGGCCGA AAAACATGCC
GAGCTGGGCT TCCGCTCTCA GGTTCAGGGC TTGCCGTCGC TGAATCCGGC CGACGTGGTC
GACCGCCGCG CGATGCGCTT CCTGGGCGAA GGCGCGGCCT GGAACCACGT CGCGATGGAA
CAGGCGCTGG CCGATTCCGG GCTCGAGGAA AGCGACATCT CCAACCCGCG CACCGGCATC
GTGATGGGCT CGGGCGGCCC GTCCGCCCGC ACCATCGTCG AGGCGGCCGA CATCACCCGC
ACCAAGGGTC CGAAGCGCGT CGGCCCGTTC GCGGTGCCGA AGGCGATGTC GTCGACGGCG
TCGGCGACGC TCGCCACCTG GTTCAAGATC AAGGGCGTCA ACTACTCGAT CTCGTCGGCC
TGCGCGACCT CGAACCACTG CATCGGCAAC GCCTATGAGC TGATCCAGTG GGGCAAGCAG
GACGTCGTGT TCGCCGGCGG CTGCGAGGAA CTCGACTGGT CGCTGTCGGT GCTGTTCGAC
GCGATGGGCG CGATGTCCTC GAAATACAAC GACACCCCGG CCACCGCCTC GCGTCCCTAT
GACGTCAGCC GCGACGGCTT CGTGATCGCC GGCGGCGCCG GCGTGCTGGT GCTGGAAGAA
CTCGAACACG CCAAGGCGCG CGGCGCCAAG ATTTATGGCG AGATCATCGG CTACGGCGCC
ACCTCGGACG GCTACGACAT GGTCGCGCCG TCCGGCGAAG GCGCCGAGCG CTGCATGAAG
ATGGCGCTTT CGACCACCGG CGGCATCAAG ATCGACTACA TCAATCCGCA CGCGACCTCG
ACGCCGGCCG GCGACCCGCC GGAGATCAAC GCGCTCCGCA ACGTGTTCGG CGCCGGCGAC
AAGTGCCCGC CGATCTCCGC CACCAAGGCG CTGACCGGCC ACTCGCTCGG CGCCACCGGC
GTGCAGGAAG CGATCTATTC GCTGCTGATG ATGCAGAACG GCTTCATCTG CGAGAGCGCC
AACATCACCG AACTCGACCC GGCGTTCGCC GACATGCCGA TCGTGCGCAA GCGGATCGAC
AACGCCAAGA TCGGCGCCGT GCTGTCGAAT TCGTTCGGCT TCGGCGGCAC CAACGCGACG
CTGGTGTTCA AGCGGCTGGA CGCGTAA
|
|---|
| Protein sequence | MRRVVVTGMG IVSSIGNNTQ EVLASLHDAK SGISRAEKHA ELGFRSQVQG LPSLNPADVV
DRRAMRFLGE GAAWNHVAME QALADSGLEE SDISNPRTGI VMGSGGPSAR TIVEAADITR
TKGPKRVGPF AVPKAMSSTA SATLATWFKI KGVNYSISSA CATSNHCIGN AYELIQWGKQ
DVVFAGGCEE LDWSLSVLFD AMGAMSSKYN DTPATASRPY DVSRDGFVIA GGAGVLVLEE
LEHAKARGAK IYGEIIGYGA TSDGYDMVAP SGEGAERCMK MALSTTGGIK IDYINPHATS
TPAGDPPEIN ALRNVFGAGD KCPPISATKA LTGHSLGATG VQEAIYSLLM MQNGFICESA
NITELDPAFA DMPIVRKRID NAKIGAVLSN SFGFGGTNAT LVFKRLDA
|
|---|
| |