Gene RPD_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0219 
Symbol 
ID4020677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp251081 
End bp251569 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID637960398 
Productferric-uptake regulator 
Protein accessionYP_567360 
Protein GI91974701 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.690506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0874636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG GTGACCGTGC GACATATTCG CGAGAGGAAA GCGTGACTTT GGCCCATGCG 
GTCGAGCCGC ACCTGAACGG TTGTCCGTGG CACGACGTCA ACGAAATGCT GCAATCGGTC
GGCCTGCGTC CGACCCGCCA GCGGATGGCG CTGGGTTGGC TGCTGTTCAG CAAGGGCGAC
CGGCATCTGA CCGCGGAAAT GCTGTACGAA GAGGCCAGCC AGGCCAAGGT TCCGGTGTCG
CTGGCGACGG TCTACAACAC CCTCAACCAG CTCACCGATG TCGGTCTGCT GCGCCAGGTC
AGCGTCGACG GAACCAAGAC CTATTTCGAC ACCAACGTCA CGGCGCACCA GCATTTCTAT
CTCGAGAACA ACCACGAGCT GATCGACATT CCGGATCAGC ACGTCGCGCT GCGCTCGACG
CCGCAGGTTC CAGACGGCTA CGAAATCGCC CGCGTCGACG TCGTGGTTCG GCTGCGCAAG
AAGTCCTGA
 
Protein sequence
MDIGDRATYS REESVTLAHA VEPHLNGCPW HDVNEMLQSV GLRPTRQRMA LGWLLFSKGD 
RHLTAEMLYE EASQAKVPVS LATVYNTLNQ LTDVGLLRQV SVDGTKTYFD TNVTAHQHFY
LENNHELIDI PDQHVALRST PQVPDGYEIA RVDVVVRLRK KS