Gene RPD_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0210 
Symbol 
ID4020668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp240150 
End bp241724 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content68% 
IMG OID637960389 
Product2-polyprenylphenol 6-hydroxylase 
Protein accessionYP_567351 
Protein GI91974692 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.443925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCTG GGCTCAGTCA TGCGGCGCGG CTCGTCCGCG CCGCCTACGT GTTTGCGCGC 
GAGGGCGTGT TCGGCGTGGT CGATCCGTCG CTGATCCCGC CCGCCGGCCA ACTGCCGGTG
CGGCTGGCGC GGCTGATCGA GCGGCCCGGC GCCAAGTCCG GCGCGCGGCT GTCGCGGGCG
CTGACGCGGC TCGGACCCGC TTATCTCAAG CTCGGACAGT TTCTCGCGAC GCGGCCCGAC
GTGGTCGGCG CGGCGATGGC GCGCGATCTC GAAGCGCTGC AGGACCGGTT GCCGCCGTTC
GCGCAGGAAG AGGCCGAGGC GGTGATCGCT GCATCGCTGG AAAGGCCTGT CGCACAGGCC
TTTGTCAGCC TCAGCCCGCC GGTGGCGGCG GCCTCGATCG CGCAGGTGCA TCGTGGCGAG
GTCGAGATCG GCGGCGTCCG CAAGCAGGTC GCCGTCAAGG TGCTGCGGCC GAACGTGGCG
TCGCGCTTCC GGCGCGATCT GTCGGACTTC TTCTTCGTCG CCGACAAGGC CGAGCAGTAT
TCGTCCGAGG CCCGGCGGCT GCGGCTGGTC GAAGTCATCA ACACGATGTC GCGCTCGGTC
GCGATGGAGA TGGATCTGCG GCTGGAAGCC GCCGCCGCCT CCGAGATGGC GGAGAACACC
AAGGACGATC CGGACTTCCG CGTCCCCACC GTCGACTGGG ACCGCACCAC TCACAACGTG
CTGACGATGG AGTGGATCGA CGGCATTCCG CTCAACGATC ACAAGCGGCT TGCCGAAGCC
AATGTCGACA CCGTCGAACT CGGCCGCAAG GTGATCCAGA GCTTCCTGCG CCACGCGCTG
CGCGACGGCT TCTTCCACGC CGACATGCAT CCGGGCAATC TGTTCCTCGA TCCCGAAGGC
CGGCTCGTCG CCGTGGACTT CGGCATCATG GGCCGGCTGC TGCCGAAGGA GCGGCGCTTC
CTCGCCGAGA TCCTGCTCGG CTTCATCACC CGCAACTATC GCCGCGTCGC CGAGGTGCAT
TTCGAGGCCG GCTACGTGCC GGCGCATCAT TCGGTGGAGA ATTTCGCGCA GGCGATCCGC
GCCATCGGCG AGCCGATCCA CAACCGCCTC GCCGAAGAAA TCTCGATGGC CAAGCTCTTG
ACGCTGCTGC TCGAGGTCAC CGGCCTGTTC GACATGCGGA CCCGGCCCGA ACTGATCCTG
CTGCAGAAGA CCATGGTGGT GGTCGAAGGC GTGGCGCGTA GTTTCGATCC GAGGCTCGAC
ATCTGGAAGG TCGCCGATCC GGTGGTGCGC GAATGGATTC AGCGCAACCT CGGCCCGATC
GGCAAGGTCG AAGGCGCGCT GACCGGCGCC GGCGAACTCG GCCACACGCT GAGCAGCCTG
CCCACCATCG TGTCGCGCGC CGTCACCGTG CTGAACCAGC TCGAAGTGAT GACCAAGGAC
GGCCTCGTCC TCGCGCCCGA GACCATCGCG GCGATCGGCC GCACCGAGCG CGGCCGCACC
CGTGGCCGGA CCGCGGCGCT GTGGATCATC GCCGTGACCT TCATCGGGGT CCTGATCGCG
ATGTCGCGGC TCTGA
 
Protein sequence
MIAGLSHAAR LVRAAYVFAR EGVFGVVDPS LIPPAGQLPV RLARLIERPG AKSGARLSRA 
LTRLGPAYLK LGQFLATRPD VVGAAMARDL EALQDRLPPF AQEEAEAVIA ASLERPVAQA
FVSLSPPVAA ASIAQVHRGE VEIGGVRKQV AVKVLRPNVA SRFRRDLSDF FFVADKAEQY
SSEARRLRLV EVINTMSRSV AMEMDLRLEA AAASEMAENT KDDPDFRVPT VDWDRTTHNV
LTMEWIDGIP LNDHKRLAEA NVDTVELGRK VIQSFLRHAL RDGFFHADMH PGNLFLDPEG
RLVAVDFGIM GRLLPKERRF LAEILLGFIT RNYRRVAEVH FEAGYVPAHH SVENFAQAIR
AIGEPIHNRL AEEISMAKLL TLLLEVTGLF DMRTRPELIL LQKTMVVVEG VARSFDPRLD
IWKVADPVVR EWIQRNLGPI GKVEGALTGA GELGHTLSSL PTIVSRAVTV LNQLEVMTKD
GLVLAPETIA AIGRTERGRT RGRTAALWII AVTFIGVLIA MSRL