Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0207 |
Symbol | |
ID | 4020665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 235444 |
End bp | 237957 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960386 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_567348 |
Protein GI | 91974689 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.749864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.519956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACG TATTGGGGTC GATGCGTCGG ACCTGCTTGT CGTGCACGTC GCTGGTGCGC GGCCTTGCGG GCGCTGGCCT TCTCGCGGCG TCGTCGCCCG CCTGGGCGGC TGACGATCCG CTCGCCACTC TGACGTCCCG CTTCATGTTC GATTTCAACC GCCACGAGCT TGTCACGCTC GCGATGGCGG CGTCGGTGCT CGGCTTCTCC GTCGTGTCCG CGATCCTGCT GATGCGCACG CGGCAACGCG CCGCCGCGCA GGAAGCGCAG CTGCGCGCCG ACGTTCAGAC TCTTCAGGCC GAGTCCGATC GCTTCCGCGC ATTGCTGTTC GCCGAGCCGC AGGTGCTGAT CTCCTGGTCC GCCGGCGACG ACCGGCCGCA GATCAGCGGC GACACTGCGC TGTTGCTGCC GCAGGAGGTG GCGAACGCCC AGCCGCAGCG CGTCCTCGCT TTCGGCACAT GGCTGCCGCC GGAACCCGCG CTGCAGATGG ATCATGCGGT CGACGCGCTG CTCGACAAGG GCGAAGCCTT TCTGCTGCAT TTAACGACGT CGACCGGCCG TTCGATCGAG GCGATGGGCC GCGCCATCGG TGGTCAGGCG ATCCTGCGAA TCCGCGAACT GAGCGGCATT CGTCGCGAAC TCGCCGACAT GTCGCGGCGC TTCAAGTCAC TGCAGGACGA GTCCGAGATG CTGCGGGGCT TCGCCAATGC CGCGCCCTGG CCGATCTGGA CCCGGCGCGC CTCGGGCGAA CTGAGCTTCG CCAACGCCGC CTATGCGCGC GCGACCGATG CGGGCAGCGC GGCGGACGCG GTCAATCGCA ATCTCGAACT GCTCGACAGT AACGACCGCG GCAATCTCGC GCGCGCGCTC AACGACAATG CCCAATTCGC CGCGCGTCTT CCGATCGTGG TCAGCGGCGA GCGCCGCTAT TTCGACGTTC GCGCGTTGCG GCTGAGCGGC GGCAGCGCCG GCATCGCGGT GGATGCGAGC GAAGCCGCGG CGCTCGGCGC CGCGTTGGTG CGGATGGCGG AGGCGCATCG CCGCACGCTC GACCAGTTGT CGTCAGGCGT CGCGGTGTTC GACGCGCAGC GCCGGCTCGC CTTCTACAAC GATTCCTATC GCAGGCTGTG GGATCTGGAC CGCGCCTTCC TCGACAGCAA CCCCGACGAT TCCAGCGTGA TCGACCGTTT GCGCGCCGCG CGCAAACTGC CCGAAGAGCG CGATTTCAGG GAGTGGAAGA AAAAGCTGCA CGAGGCCTAT CGGGCGGTCG AGCCGGAGAA GGCGATCTGG TATCTGCCCG ACGGCCGCGC GATCAGCATC GTCACCACGC CCAATCAGGA GGGCGGCGTC ACCTATCTGT TCGACGACGT CACCGAGAGC CTGGAACTGC AGCGCCGCTA CGGCGGCCTG ATCGATGTCC AGCGCGAGAC GCTCGACAAT CTGACCGAGG CGGTCGCGGT GTTCGGCAGC AATGGCTGCG CGCAATTGTT CAACCCCGCG TTCACGCGGA TGTGGAATCT CTCGCCGGAA GCGCTCAACA ACCGGCCGCA TATCGAAACC GTCGAGGAAT GGTGCCGCCC GCTGTTCGAC GACGCGGTGA GTTGGCAGGC GCTGCGTAGC GCGATCACCG GAATCGACGA CCGCAAGCAC GTGCTGCTGA AGCTCGAGCG CAAGGACGGC ACCGTGCTGT CCTGCAAGAC GATGCCGCTG CCCGACGGCG CGACGATGCT GACGTTCCTG GACATCAGCG ACACCGAGAA TGTCGAGCGC GCCTTGCGGG AGCGCAATGA GGCGCTGGAG ACGGCCGACC GCATCAAGGT CGATTTCGTC CACCACGTGT CTTACGAATT GCGTTCGCCG CTGACGACGA TCATCGGCTT CGCGCATCTG CTCGGCGATC CGAGCACCGG TCCGCTCAAC GACAAGCAGT CCGAATACAT CGCCTACATC ACCTCGTCGA CCAACGCGCT GATGGCGATC ATCAACAACA TCCTCGATCT CGCCAGCATC GACGCCGGCG CGATGACGCT CAATCTCGGG CCGATCGATA TCGGTCGCGC GATCGACGCG GCCGCCGAAG GCATTCAGGA TCGCCTCGCG CGCGATCAGA TCACGCTCGA CGTCGAGATC GATCCCGCGG TCGGCGAATT TGTCGGCGAC GAACGCCGCG TCGTGCAGGT GCTGTACAAT CTGCTCGCCA ATGCGGTCGG CTTCTCGCCG AACCAGGCGA CCGTGACGCT CGTGGTCCAC AAGATCGGCG CGAAGGTGGT CTTCACCGTG ACCGACGCCG GTCCCGGGAT TGCGCCGGAG CTGAAGGACA AGGTGTTCGA CTGGTTCGAG AGCCACTCCC AGGGCTCGCG GCATCGCGGC CCGGGCCTCG GCCTGGCGCT GGTGCGCTCC TTCGTCGAAC TGCACGGCGG CAAGGTCCAG GTCGATTCGG TGGTCGGACG CGGCACTTCG GTGATCTGCG AATTTCCGAT CGAACCGTCC GCGCAGCGCA ACGCCGCCGA ATGA
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Protein sequence | MSDVLGSMRR TCLSCTSLVR GLAGAGLLAA SSPAWAADDP LATLTSRFMF DFNRHELVTL AMAASVLGFS VVSAILLMRT RQRAAAQEAQ LRADVQTLQA ESDRFRALLF AEPQVLISWS AGDDRPQISG DTALLLPQEV ANAQPQRVLA FGTWLPPEPA LQMDHAVDAL LDKGEAFLLH LTTSTGRSIE AMGRAIGGQA ILRIRELSGI RRELADMSRR FKSLQDESEM LRGFANAAPW PIWTRRASGE LSFANAAYAR ATDAGSAADA VNRNLELLDS NDRGNLARAL NDNAQFAARL PIVVSGERRY FDVRALRLSG GSAGIAVDAS EAAALGAALV RMAEAHRRTL DQLSSGVAVF DAQRRLAFYN DSYRRLWDLD RAFLDSNPDD SSVIDRLRAA RKLPEERDFR EWKKKLHEAY RAVEPEKAIW YLPDGRAISI VTTPNQEGGV TYLFDDVTES LELQRRYGGL IDVQRETLDN LTEAVAVFGS NGCAQLFNPA FTRMWNLSPE ALNNRPHIET VEEWCRPLFD DAVSWQALRS AITGIDDRKH VLLKLERKDG TVLSCKTMPL PDGATMLTFL DISDTENVER ALRERNEALE TADRIKVDFV HHVSYELRSP LTTIIGFAHL LGDPSTGPLN DKQSEYIAYI TSSTNALMAI INNILDLASI DAGAMTLNLG PIDIGRAIDA AAEGIQDRLA RDQITLDVEI DPAVGEFVGD ERRVVQVLYN LLANAVGFSP NQATVTLVVH KIGAKVVFTV TDAGPGIAPE LKDKVFDWFE SHSQGSRHRG PGLGLALVRS FVELHGGKVQ VDSVVGRGTS VICEFPIEPS AQRNAAE
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