| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0197 |
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| Symbol | |
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| ID | 4020655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 220569 |
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| End bp | 221783 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960376 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_567338 |
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| Protein GI | 91974679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA TCCTGCCGAA TTCGTTTCGA TCCGGTCCCG ACGAGCGCGG GCATTTCGGC
ATTTTCGGCG GCCGCTTCGT CGCCGAGACG TTGATGCCGC TGATCCTGGA GCTGGAAAAG
GCCTACGCTG AGGCAAAAGA CGATCCGGCG TTTCGCACCG AGATGGACGG CTATCTCAAG
CATTATGTCG GCCGGCCGTC GCCGCTGTAT TTCGCCGAGC GGCTGACCGA GCATTTCGGC
GGCGCCAAGA TCTACTTCAA GCGCGAGGAT CTCAATCACA CCGGCGCCCA CAAGGTGAAC
AACGTGCTCG GCCAGATCAT GCTGGCCAGG CGGATGGGCA AGCAGCGGAT CATCGCCGAG
ACCGGCGCCG GCATGCACGG CGTCGCCACC GCCACGATGT GCGCCAAGTT CGGCCTGCAA
TGCGTGGTCT ATATGGGCGC GGTCGACGTC GAGCGGCAGC AGCCCAATGT GCTGCGGATG
AAGGCGCTGG GCGCCGAAGT CCGCCCGGTG ACCTCCGGCG CCAACACGCT GAAGGACGCG
ATGAACGAGG CGCTGCGGGA CTGGGTCACC AACGTTCACG ACACCTTCTA CTGCATCGGC
ACCGTCGCGG GCCCGCACCC CTATCCGATG ATGGTGCGCG ACTTCCAGGA GGTGATCGGC
CAGGAGGTGC GCGAGCAGAT TCTGGAGACC GAAGGCCGGC TGCCGGATTC GCTGATCGCC
TGCATCGGCG GCGGCTCCAA CGCGATGGGC CTGTTTCACC CCTTCCTCGA CGACGCCGGC
GTCGTGATCT ACGGCGTCGA AGCCGCGGGC CATGGCCTCA GCAAGCTGCA TGCGGCGTCG
ATCGCCGGCG GCAAGCCCGG CGTGCTGCAC GGCAATCGCA CCTATCTGCT GATGGACGAT
GACGGCCAGA TCCAGGAAGC GCATTCGATT TCCGCCGGCC TCGACTATCC CGGCATCGGC
CCCGAGCACG CCTGGCTGCA CGATGTCGGC CGCGTCAACT TCCTGTCGGC CACCGACGCC
GAGGCGCTCG ACGCCTTCAA GCTGTGCTGC CGTCTCGAGG GCATCATTCC GGCGCTGGAG
CCGGCGCATG CGCTGGCCAA GGTCGCCGAT CTCGCGCCGA TCCTGCCGAA GGATCACTTG
ATGGTGCTCA ACATGTCCGG CCGCGGCGAC AAGGATCTCG CTTCTGTGGC CGAGCATCTC
GGGGGCAAGT TCTGA
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| Protein sequence | MNQILPNSFR SGPDERGHFG IFGGRFVAET LMPLILELEK AYAEAKDDPA FRTEMDGYLK
HYVGRPSPLY FAERLTEHFG GAKIYFKRED LNHTGAHKVN NVLGQIMLAR RMGKQRIIAE
TGAGMHGVAT ATMCAKFGLQ CVVYMGAVDV ERQQPNVLRM KALGAEVRPV TSGANTLKDA
MNEALRDWVT NVHDTFYCIG TVAGPHPYPM MVRDFQEVIG QEVREQILET EGRLPDSLIA
CIGGGSNAMG LFHPFLDDAG VVIYGVEAAG HGLSKLHAAS IAGGKPGVLH GNRTYLLMDD
DGQIQEAHSI SAGLDYPGIG PEHAWLHDVG RVNFLSATDA EALDAFKLCC RLEGIIPALE
PAHALAKVAD LAPILPKDHL MVLNMSGRGD KDLASVAEHL GGKF
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