| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0194 |
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| Symbol | ihfB |
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| ID | 4020652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 219124 |
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| End bp | 219429 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637960373 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_567335 |
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| Protein GI | 91974676 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.165433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAT CCGAACTCGT TCAGCGTATC GCCGAGCACA ACCCGCACCT CTATCAGCGG
GACGTCGAGA ACATCGTCAA CGCGATCCTC GACGAGATTG TCGACGCGTT GGCGCGTGGC
GATCGGGTTG AGCTGAGAGG CTTCGGAGCG TTTTCGGTGA AGCATCGGCC CGCGCGCGCC
GGCCGCAATC CGCGGACTGG CGCGCATGTT CCGGTCGACC AAAAGAGCGT GCCGTTTTTC
AAGACCGGCA AGGAAATGCG CGAACGGTTG AATCGCGAGC CCGGGAATAC TGATACCGGC
GCGTGA
|
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| Protein sequence | MIKSELVQRI AEHNPHLYQR DVENIVNAIL DEIVDALARG DRVELRGFGA FSVKHRPARA
GRNPRTGAHV PVDQKSVPFF KTGKEMRERL NREPGNTDTG A
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