| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0176 |
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| Symbol | |
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| ID | 4020633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 200078 |
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| End bp | 200743 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960354 |
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| Product | OstA-like protein |
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| Protein accession | YP_567317 |
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| Protein GI | 91974658 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.435721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAACG CCCGTTGCCT TCTCGCTCGT CGCAAACTGC TTGCGATCGC CGGCGCAGCG
TTTCTGGCCG GCTCGGCGAA CTTGTCGGGC GCGTTGGCGC AAAGCGCCGT GCAAGGCGTG
CCGAACGCGA TGCAGGGCTT CTCGCAGAAT CGCGATCAGC CGATCCAGAT CGAATCCGAC
ACGCTGGAGG TTCGCGACAA AAAGAAAGAG GCGACCTTCA CGGGCAGTGT CAAGGTGGTC
CAGGGCGACA CCACCATGAC CTCGAAGACC CTCGTGGTGT TCTACGATCA GGATCAGTCC
GAGACCTCCG CCAAACAAGC CAAGCGCAAG GCGATGCCCG CAGCAGCGCC GGGTCCCGGC
GGCACGTCGT CGATTCGCCG GCTCGAGGCC AAGGGCAATG TGGTGGTCAC CCAGAAGGAT
CAGGTGGTGA CCGGCGACAG CGCGGTGTTC GATACCAAGA CCAATCTGGT GACGATGCTG
GGGAGCGTGG TGCTCACTCA GGGCAAGAAC GTGGTGCGCG GCGATCGGCT GCTGGTCGAC
ATGACCACCG GCGTGTCGCG CGTCGAATCC AACAGCGGCC GGGTGCAGGG CCTGTTTCAG
TCGTCAGGCA GCGGATCAGG CGCCCCGCTC GGCATCGGGC CGCCCCCAGC GGGCCAGAAG
AAATGA
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| Protein sequence | MTNARCLLAR RKLLAIAGAA FLAGSANLSG ALAQSAVQGV PNAMQGFSQN RDQPIQIESD
TLEVRDKKKE ATFTGSVKVV QGDTTMTSKT LVVFYDQDQS ETSAKQAKRK AMPAAAPGPG
GTSSIRRLEA KGNVVVTQKD QVVTGDSAVF DTKTNLVTML GSVVLTQGKN VVRGDRLLVD
MTTGVSRVES NSGRVQGLFQ SSGSGSGAPL GIGPPPAGQK K
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