Gene RPD_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0175 
Symbol 
ID4020632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp199311 
End bp200081 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID637960353 
Producthypothetical protein 
Protein accessionYP_567316 
Protein GI91974657 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCGG TTCAGACGGC GGCCTATCAC ACCAGCATGG AGGCGCGCTT CGCGGCGGCG 
GCGCGCCATA GCCGGCTGGT GCGAACGCTG CGGGTCGCGG TGCCTCTGGT GGTGGCGCTG
TCGCTCGCTG CGATCCTCGC CATCTCGATC TTCAACCCGT TCCGCCTGCT GTCGAAACTG
CCGATCGACA TTGGCGATCT GGTGGTGTCC GGAACCAAGA TCACAATGGA GTCGCCGCAT
CTTGCGGGCT TCACCAATGA CGGGCGGCCC TATGAGATGT GGGCGCGATC GGCGACCCAG
GATCTCACCA GCCAGGACCA TGTCGATCTA CATACGCTGC GGGCGAAGGT GGTCAGCGAC
GACCAGTCCA CCGTGCTGAT CCAGGCCCGC GACGGCAAGT TCAACACCAA GGCTCAGCTT
TTGAACCTGC AGAAGGACGT GTATCTGCGC ACATCGACCG GCAGCGAGGC GTGGATGACT
CAGGCCGACA TCGATATGGG CAAAGGCAAT GTCTCGTCTG ACGAGCCGGT CGACGTCAAA
TGGCTCGGCG GCACGTTGCG CGGGCAGCGG CTGCGCATTA CCGAGAAGGG CGACGTGATC
CGATTCGAGG GCGGGGTGGT GATGAACCTG GACAACGCCA ATCTGCCGGA GCCCGCCGAG
GAGACCGACA CGCGTGCGCA GCCCGCTCCG GCCGCGGTTC CGAACGCCGA CGCGGCGGCC
AAATCGAAGT CGTCGCAACC GGGCCAACGC CGCGAAGTGA ACCGCCCATG A
 
Protein sequence
MASVQTAAYH TSMEARFAAA ARHSRLVRTL RVAVPLVVAL SLAAILAISI FNPFRLLSKL 
PIDIGDLVVS GTKITMESPH LAGFTNDGRP YEMWARSATQ DLTSQDHVDL HTLRAKVVSD
DQSTVLIQAR DGKFNTKAQL LNLQKDVYLR TSTGSEAWMT QADIDMGKGN VSSDEPVDVK
WLGGTLRGQR LRITEKGDVI RFEGGVVMNL DNANLPEPAE ETDTRAQPAP AAVPNADAAA
KSKSSQPGQR REVNRP