Gene RPD_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0169 
Symbol 
ID4020625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp193195 
End bp193992 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID637960346 
Producthypothetical protein 
Protein accessionYP_567310 
Protein GI91974651 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT CCGCAGCAGC CCCGAAAGGG TCCGATCCAG CCTTCATCAG CGTCGGCGAA 
GGCGCCGCCG AGCGCCGGAT CGCCGTCCGG GCGCGCGCGG GCCACGCTCC CGGCCTGTTC
TGGCTCGGCG GCTTCAACTC GGACATGACC GGGACCAAGG CCGTCGCGCT CGACGGATGG
GCCGCCGAAC GCGGCCGGGC CTGCGTCCGG TTCGATTATT CCGGCCATGG TTCCTCCTCG
GGCGCCTTCG CGGACGGCAC GATCAGCCGC TGGCTGGAAG ACAGCCTTGC GGTGTTCGAC
CGCTTCGCGA CAGGCCCGCA GGTGGTGATC GGCTCGTCGA TGGGCGGCTG GATGGCGCTA
CTGCTGGCGC GCGAATTGAT CCGCCGCGGC GGCGAGGGCC AGACCAAGCT CGCCGGCCTG
GTGTTGATCG CGCCAGCGCC GGATTTCACC GAAGCGCTGA TGTGGAAGGG CTTTTCGCCC
GAGATCCGCC GCCAGATCGA GACCGAGGGG GTCTGGATGC GGCCGTCGGA CTATGGCGAC
GCCTATCCGA TCACGCGCGC GCTGATCGAG GACGGCCGCA ACCATCTGCT GCTCGGCGGC
GCGATCAGCG TCGGCTGCCC GGTCCGCATC CTGCAGGGCA AGCAGGACCC CGACGTGCCG
TGGACCCACG CCTTCGCCCT GACCGAGCGG CTGCCCTGCG AGGACGTCGT ACTGACCCTG
ATCCAGGACG GCGACCACCG CCTCTCCCGG CCGCAGGACA TCGCGCGGAT GCTGGCGGCG
GTCGAGGAGA TCGGGTGA
 
Protein sequence
MTNSAAAPKG SDPAFISVGE GAAERRIAVR ARAGHAPGLF WLGGFNSDMT GTKAVALDGW 
AAERGRACVR FDYSGHGSSS GAFADGTISR WLEDSLAVFD RFATGPQVVI GSSMGGWMAL
LLARELIRRG GEGQTKLAGL VLIAPAPDFT EALMWKGFSP EIRRQIETEG VWMRPSDYGD
AYPITRALIE DGRNHLLLGG AISVGCPVRI LQGKQDPDVP WTHAFALTER LPCEDVVLTL
IQDGDHRLSR PQDIARMLAA VEEIG