Gene RPD_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0168 
SymbolinfC 
ID4020624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp192320 
End bp192718 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID637960345 
Producttranslation initiation factor IF-3 
Protein accessionYP_567309 
Protein GI91974650 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGG AAGCAGGCAT GGATCTGGTC GAGATTTCGC CGAACGTCAG TCCGCCGGTC 
TGCAAGATCA TGGACTACGG CAAGTTCAAG TACTCGGCGC AGAAGAAAGC CGCCGAGGCG
CGCAAGAAGC AGAAGATCGT CGAGATCAAG GAGATCAAGC TCCGCCCGAT GATCGACGAC
CACGACTACG ACGTGAAGAT GAAGGCGATG CAGCGCTTCT TCGAGGAAGG CGACAAGGTG
AAGATCACTT TGCGCTATCG CGGACGCGAA ATGGCCCACC AGGAAATCGG CACCAAGCTG
CTGGAAAAGG TGAAGGCCGA CGTCGCCGAA ATCGCCAAGG TCGAGCAGGA CGCCCGCTTC
GAAGGCCGTC AGGTGGTCAT GGTGCTGGCG CCGCGCTGA
 
Protein sequence
MAMEAGMDLV EISPNVSPPV CKIMDYGKFK YSAQKKAAEA RKKQKIVEIK EIKLRPMIDD 
HDYDVKMKAM QRFFEEGDKV KITLRYRGRE MAHQEIGTKL LEKVKADVAE IAKVEQDARF
EGRQVVMVLA PR