Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0162 |
Symbol | pheT |
ID | 4020618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 185997 |
End bp | 188471 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637960339 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_567303 |
Protein GI | 91974644 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.676244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCGCAGC TTCAGCATTC AGCACGACGC CAGCACAGCG CCAGACGGAA GTCACAACCC ATGAAACTCA CCCTCTCCTG GCTGAAGGAT CATCTCGACA CCGACGAGAC GCTCACCGCG CTCGCCGACA AGCTCACCAT GATCGGGCTC GAGGTCGAGG ACATCACCGA CAAGGCGAAG GCCCTGGCGC CGTTTACGAT TGCGCGGGTG CTCAGCGCCG AGAAGCATCC CAATGCCGAC AAGCTGCAGG TCTGCAGCGT CGACACCGGC GATGGCGGCG CGCCCGTGCA GGTGGTGTGC GGCGCGCCGA ATGCGCGGGC CGGGCTGATC ACGGTGTTCT CGCCGCCCGG CACCTTCATT CCGGGCAAGA ACATCACGCT CGGCGTCGGC AATATCCGCG GCGTCGAGAG CCGCGGCATG TTGTGCTCGG CCGCCGAGTT GCAGATCTCC GAGGATCATG ACGGCATCAT GGAATTGCCG GCGGATGCGC CGATCGGCAA GGCCTATGCG GAGTGGGCCG GGCTCGGCGA TCCGGTGCTC GACATCAATC TGACGCCGAA CCGGCAGGAT TGCGCGGGCG TCCACGGCAT CGCGCGCGAT CTCGCCGCCG CCGACATGGG CAAGCTGAAA GAGTCCGGCA TCAAGCCGAT CAAGGGCGAA TTCCCCTGCC CGGTGCAAGT GAGCGTCGAG GACGACAAGC TCTGCCCCGG CTTCGCGCTG CGGCTGGTGC GCGGCGTCAA GAACGGCCCG TCGCCGGAAT GGCTGCAGAA GCGATTGACC GCGATCGGGC TGCGCCCGAT CAACGCGCTG GTCGATATCA CCAACTTCCT GACCTTCGAC CGGTCGCGGC CGCTGCACGT GTTCGACGCC GCCAAGGTGA AGGGCAATCT CGTGGTGCGC CGCGCCAGGG ACGGCGAGAC GCTGCTGGCG CTCGACGGGC GTAACTACAA TCTCGACCCG GGCGTCTGCG TGATCGCCGA CGATCACGGC GTCGAATCGC TCGCCGGCAT CATGGGCGGC GAAGCCTCCG GCTGCTCGGC CGAGACCACC GACGTGCTGA TCGAATCGGC GCTGTGGAAC GAAATCAACA TCGCCCAAAG CGGCCGCAAG CTCGGCATCA ACACCGACGC GCGCTATCGC TTCGAGCGCG GCGTCGATCC GGCCTTCATG GTGCCGGGGC TGGATCTCGC GACCCGGCTG GTGATCGAAT TCTGCGGCGG CACGCCGTCC GAGATGGTGG TCGTCGGCAG GACGTTCGGC GACGATCGCA TCATCGACTT CCCGCTGTCC GAGGTGAAGC GGCTCGCCGG CATCGACGTG CCGCTCGCCG AGGCGCGGCG CATCCTCACG CATCTCGGCT TCATGGTCGC AGGCCAGGGC GCGGTGGTGA AGGTGGCGGC GCCGTCGTGG CGCAGCGACG TGCACGGCAA GGCCGACATC GTCGAGGAAA TCGTCCGCAT CGTCGGCGTC GACAAGGTGC CGATGACGCC GTTCGAGCGC GGCGACGCGC CGCGCAAGCC GGTGCTGACG CCGATCCAGA CCCGCACCCG CCGCGCCAAG CGTGCGCTGG CGGCGCGCGG CCTGACCGAG GCGGTGACCT GGTCGTTCAT CGCCAAGCCC AGCGCCGAAG CCTTCGGCGG CGGCCAGCCC GAACTGGCGC TGGCCAATCC GATCGCGTCG GATTTGTCCG ACATGCGGCC GAGCCTGCTG CCGGGCCTCG TCGCCGCCGC GCAGGCCAAC GCCGATCGCG GCACGCCTGA TCTGGCGCTG TTCGAGGTCG GGCAGATCTT CAAGGGCGAC CGGCCGCAGG ATCAGTTCGT CGCGGCGAGC GGCGTGCGTC GCGGCGTCGC CTCATCGAAC GGGCTCGGCC GGCACTGGTC CGGCTCGGCG CCGGCCTCGG CGCTCGACGC CAAGGCCGAT GCCTTCGCGG TGCTCGCCGC CGCCGGTGCG CCGATGGCGG GCCTGCAGAT CGCCACCGGC AAGGCGCTGC CGGCCTGGCT GCATCCCGGC CGCTCCGGCG CGATCCAGAT CGGGCCGCAG AACGTGCTGG GTTATTTCGG CGAACTGCAT CCGCGCGTGC TGGAGCAGTT GCACGCCGAC GGCCCGCTGG TCGGGTTCGA AGTGATCCTC GACAACATCC CCGCCGCCAA GCAGCGGCCG ACCCGCGCCA AGCCGTCGCT GGAGCTGTCC GCATTCCAGC CGGTGTCGCG CGACTTCGCC TTCATCGTCG ACCGCAAGGT TCAGGCTGCC GACATCGTCC GCGCCGCGCA GAGCATCGAC AAGAAGCTGA TCAGCTCGGT CGTCGTGTTC GACGTCTACG AAGGCAAGGG CGTCGATCCC GACAAGAAGT CGGTGGCGAT CGCAGTGTCG CTGCAGCCGC GCGACAAGAC CATGACCGAT CAGGAGATCG ACGCCGTGGG CGCGAAGATC GTCGCCGAGG TGACCAAGAA AACCGGCGGC GTGCTGCGCG GATAG
|
Protein sequence | MSQLQHSARR QHSARRKSQP MKLTLSWLKD HLDTDETLTA LADKLTMIGL EVEDITDKAK ALAPFTIARV LSAEKHPNAD KLQVCSVDTG DGGAPVQVVC GAPNARAGLI TVFSPPGTFI PGKNITLGVG NIRGVESRGM LCSAAELQIS EDHDGIMELP ADAPIGKAYA EWAGLGDPVL DINLTPNRQD CAGVHGIARD LAAADMGKLK ESGIKPIKGE FPCPVQVSVE DDKLCPGFAL RLVRGVKNGP SPEWLQKRLT AIGLRPINAL VDITNFLTFD RSRPLHVFDA AKVKGNLVVR RARDGETLLA LDGRNYNLDP GVCVIADDHG VESLAGIMGG EASGCSAETT DVLIESALWN EINIAQSGRK LGINTDARYR FERGVDPAFM VPGLDLATRL VIEFCGGTPS EMVVVGRTFG DDRIIDFPLS EVKRLAGIDV PLAEARRILT HLGFMVAGQG AVVKVAAPSW RSDVHGKADI VEEIVRIVGV DKVPMTPFER GDAPRKPVLT PIQTRTRRAK RALAARGLTE AVTWSFIAKP SAEAFGGGQP ELALANPIAS DLSDMRPSLL PGLVAAAQAN ADRGTPDLAL FEVGQIFKGD RPQDQFVAAS GVRRGVASSN GLGRHWSGSA PASALDAKAD AFAVLAAAGA PMAGLQIATG KALPAWLHPG RSGAIQIGPQ NVLGYFGELH PRVLEQLHAD GPLVGFEVIL DNIPAAKQRP TRAKPSLELS AFQPVSRDFA FIVDRKVQAA DIVRAAQSID KKLISSVVVF DVYEGKGVDP DKKSVAIAVS LQPRDKTMTD QEIDAVGAKI VAEVTKKTGG VLRG
|
| |