| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0157 |
|---|
| Symbol | |
|---|
| ID | 4020613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 177483 |
|---|
| End bp | 179273 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637960334 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_567298 |
|---|
| Protein GI | 91974639 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTC TCGACACGGT CAGCATAACG ATCCTGCTCG GCGCGATCCT GGTGATGGCG
GGCATCCTGT CGAGCCTGCT GGCGCTGCGT TTCGGCGCGC CGTTGCTGCT GGTGTTCCTC
GTGCTCGGTA TGCTGGCCGG CGAGGCCGGG CCCGGCGGTC TGAGGTTCGA CGATCTCAGC
ACCACCTATC TGGTCGGCTC GGTCGCGCTG GCGCTGATCC TGTTCGACGG CGGGCTGCGC
ACGCGATTCC AGACCATCAA GGCGGTGCTG GCGCCATCGA TGGGGCTGGC GACGGCCGGC
GTGCTGCTGA CGGCCCTGAT AACCGCGCCG GTCGCCCATT ACGCGCTCGA TCTGAGCTGG
ACCGAGGCGC TGCTCGCCGG CGCCGTCGTG GCCTCGACCG ACGCCGCCGC GGTGTTTCTG
CTGGTGCATT CGCAGGGGCT GCGGCTGCGG CCCCGCGTCG GCGCGACGCT GGAGGTTGAA
TCCGGCACCA ACGATCCGTT CGCGGTGTTT CTGACGCTGA TGCTGGTCGA GTTGATCACC
CGCGGCGGAA GCACGATCTG GTACGTGATC TTCGAGTTCG TCCGCGAAGC CGCGCTCGGC
ACGGTGATCG GCGTGGTCGG CGGCCGCGCC GTGGTGATGG CGCTGAACCG GGTGGCGCTG
CCGCAGGGGC TGCACGCGCC GTTCGTCACC ACCGCCGCGC TGGTGGTGTT CGGCGCCGCG
CAGATGCTGC ATGCATCGGG CTTTCTCGCG GTCTATCTCG CCGGCATGAT CATCGGCAAT
CAGCCGACCC GCGCGCACAA TTCCGTGGTG GCTTTTCTCG ACGCCGCGAC CTGGCTGGCG
CAGATCGTGA TGTTCGTCCT GCTCGGCCTG CTGGTGTCGC CGCAGCGGCT GATGATGAGC
ATCGGGCCGG CGGTGCTGGT GGCGCTGGCG CTGATGCTGG TGGCGCGGCC GGTCGCCGTG
TTCCTGTGTC TGGCGCCGTT CCGCTTCAAC TGGCGGGAAC GCCTGTTCAT CGCCTGGGTC
GGACTGCGCG GCGCGGTCGC GATCTTCCTC GCCTCGATCC CGATGATGGT CGGGCTGCCG
AAGGCGCATC TGTATTTCGA CGTCGCCTTC GTGGTGGTGA TCATCTCGCT GCTGCTGCAG
GGCTGGACGC TGGGGCCGGC GGCGCGGAAG CTGCACATCG CGCTGCAACG CACCGACCGC
GGCCCGCGCC GTATCGAACT CGATCTGCCC GGCCAGCTCG AGCAACAGCT GGTCGGCTAT
GCGGTGCGGC CGAAAAGCCT GTTCCTGCGC CGCGGCCTGG TCCCGTCATG GTCGAAGCCG
ACGCTGGTGA TCCGCGACGA GCGCATCCTG ACGCCGGAGG AGGCCGATCC GGTCGCGGCC
GGCGATTACG TCTATCTGCT GGCCCCGCCG GAAAAGGCTG AGGCGCTCGA CCGCTTCTTC
GTCGACATGC CGCCCTCGAC TGCGCCCGAT CCGCATCTGC TCGGCGATTT CGTCGTGCCC
GGCGAGACCT CGCTCGGCGA TCTCGCCGCC GCCTATGGGG TGAGCGTGCA GGCCGGCGAA
GAAGCGCTGA CGCTGGCGGA TTATTTCGAC ATCCATCTCG ACCGCGCGCC GACCGTCAAT
GCCACGGTGG CGCTGGATTC GATCGTGCTG GTGGCGCGCA GCCTCGGCGG CGGCCGGGTC
AATGTGGTCG GCCTGCGGCT GCCGGAAGAC GACGACGCGC CGCCGCCGAC CCGCGTTCAA
AAGGCCAGGC GCAAGCTGTC CAAGGTGTGG TCGACGCTGT CGGGGGTTTG A
|
|---|
| Protein sequence | MDSLDTVSIT ILLGAILVMA GILSSLLALR FGAPLLLVFL VLGMLAGEAG PGGLRFDDLS
TTYLVGSVAL ALILFDGGLR TRFQTIKAVL APSMGLATAG VLLTALITAP VAHYALDLSW
TEALLAGAVV ASTDAAAVFL LVHSQGLRLR PRVGATLEVE SGTNDPFAVF LTLMLVELIT
RGGSTIWYVI FEFVREAALG TVIGVVGGRA VVMALNRVAL PQGLHAPFVT TAALVVFGAA
QMLHASGFLA VYLAGMIIGN QPTRAHNSVV AFLDAATWLA QIVMFVLLGL LVSPQRLMMS
IGPAVLVALA LMLVARPVAV FLCLAPFRFN WRERLFIAWV GLRGAVAIFL ASIPMMVGLP
KAHLYFDVAF VVVIISLLLQ GWTLGPAARK LHIALQRTDR GPRRIELDLP GQLEQQLVGY
AVRPKSLFLR RGLVPSWSKP TLVIRDERIL TPEEADPVAA GDYVYLLAPP EKAEALDRFF
VDMPPSTAPD PHLLGDFVVP GETSLGDLAA AYGVSVQAGE EALTLADYFD IHLDRAPTVN
ATVALDSIVL VARSLGGGRV NVVGLRLPED DDAPPPTRVQ KARRKLSKVW STLSGV
|
|---|
| |