| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0156 |
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| Symbol | |
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| ID | 4020612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 175945 |
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| End bp | 177258 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960333 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_567297 |
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| Protein GI | 91974638 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0421972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC TCACCCAGGC TTATGAGGCG CTGCTGGCGG CCGCGAGTTC GGTCGGCGCC
GAAATCACCT CCCCGTGGTT CTATGCCCAG CTCGGCATGA TCCTCGCCGC GCTCGGCATC
GGGCTCGGCG GCGGCGCGCT GATCAAGGCG CGGGTCGACA TGACCACGCT GACGATGGGG
TGGCCGGCGC CGCTGCGGAT GTTCCTGCGG GTGGTAATCG ACAGCGCCTG GACCGCGATC
TTCGCGCTGG TGGTGATCGC GGTGCGGCTG GCGATGCTGC AGATGACCTG GCCGAGCCGC
AGCTATCTGA TCGGCGTTTC GGCCAAGCTG GCGCTGGCCT GGTTGATGAT CCGGCTGGTC
ACCAGCATCC TGCGCAACCC GTTCCTGATC CGCGTGGTGT CGCTATCGGC GTGGTGCGTG
GCGGCGCTCA GCATCATCGG GCAGTTGTTT CCCGTGCTCG ACGCGCTGGA TTCGGTCGCG
ATCGAGATCG GCGAGCTGCG GCTGTCGCCG TTCTTGATCC TCAAGCTCGG CGTGCTGCTG
GCGATCGCGC TGTGGCTCGC CAGTATCGCC AGCAACTTCT TCGAAGGCCG GATCAACCAG
TCGCGCGATC TCACTCCGTC GATCCAGGTG CTGCTGATCA AGCTGATGCG GATCGGCCTG
ATGGCCGCCG CGATCGCGCT GACGATGAGC GCGGTCGGCA TCAATCTGCA GGCGCTGGCG
GTGTTCTCCG GCGCGGTCGG CGTCGGCATC GGCTTCGGCC TGCAGAAGAT CTTCGCCAAT
TTCATCTCCG GCGTGATCCT GCTCGTCGAC AAATCGGTGA AGCCGGGCGA TCTCGTCACC
ATCGGCGACA ATTCCGGCAG GATCAGCGCG ATGAACACCC GCTACATCTC GGTCGCCGCC
GGCGACGGCC GCGAATTCCT GATCCCGAAC GAGGACTTGA TCACCCAAAA GGTGGTCAAC
TGGACCTATA CGGACAAGAA TACACTGGTG AAGGTCGCCT TTGCGACCAA TTACGACGCC
GATCCGCGTA CCGTCTGCCG GCTCGCGATC GACGTCGCCG CCGCGGTGCC GCGCGCGTCG
AAGGCCAAGT CCCCGGGCTG TATCCTGACC GAATTCACCG AAACGGGCAT GAAGTTCGCG
CTGACTTTCT GGATCGGAGA GCCCGACGGC ATGGACGGCG TCAAGAGCGA GGCGATGCTC
GGGCTGTGGG ACGCTTTCAG GCGCGAGGGC ATCGGTGTTC CATACCCGGT GCGGGAAATC
CGGGTTCGCA ACGGCGCGCT GCCGGCCGAG ACCATCGTCG AGGTGCCGCA ATGA
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| Protein sequence | MIDLTQAYEA LLAAASSVGA EITSPWFYAQ LGMILAALGI GLGGGALIKA RVDMTTLTMG
WPAPLRMFLR VVIDSAWTAI FALVVIAVRL AMLQMTWPSR SYLIGVSAKL ALAWLMIRLV
TSILRNPFLI RVVSLSAWCV AALSIIGQLF PVLDALDSVA IEIGELRLSP FLILKLGVLL
AIALWLASIA SNFFEGRINQ SRDLTPSIQV LLIKLMRIGL MAAAIALTMS AVGINLQALA
VFSGAVGVGI GFGLQKIFAN FISGVILLVD KSVKPGDLVT IGDNSGRISA MNTRYISVAA
GDGREFLIPN EDLITQKVVN WTYTDKNTLV KVAFATNYDA DPRTVCRLAI DVAAAVPRAS
KAKSPGCILT EFTETGMKFA LTFWIGEPDG MDGVKSEAML GLWDAFRREG IGVPYPVREI
RVRNGALPAE TIVEVPQ
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