| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0126 |
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| Symbol | |
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| ID | 4020582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 144990 |
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| End bp | 146315 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960303 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_567267 |
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| Protein GI | 91974608 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTGA TTGGTGAATT TGGTCGTCCG CCGGAGATGC CGGCGGAAGT TAGTCCGGCG
ATGACCACGC CGATGTACTG GTTCTACGAA CTCGCCCATG CCTCGCTCAA TCCGGCGCGG
GCGATGTCGG ATGCGGCGCG GTTGATGTTC AAGAACCCGC TGAATCCCTG GTCCCACACC
GATCTGGGCA AATCGATCGC CGCTGCCTGC GAAGTGTTCG AGCGCACCAC GCGCCGTTAC
GGCAAGCCTG AATGGGGCCT CGACGACACC GAGGTCAACG GCATGCGCGT GCCGATCGAA
ATTCACAACG TCTGGGAAAA GCCGTTCTGC CGCCTGCTGT ATTTCGAACG CAAGCTGGAA
CACCCGCTGC GCCATCCGCA GCCGCGGGTG CTGATCGTGG CGCCGATGTC GGGCCACTAC
GCGACGCTGC TGCGCGGCAC GGTGGAAGCT TTCCTGCCGA CCCACGAGGT CTACATCGCC
GACTGGACCG ACGCCCGGAT GGTGCCGGTC GCCGCCGGCC GGTTCGATCT CGACGATTAT
GTCGATTACG TCATCGAGAT GCTGCAGACG CTGGGCGGCA ACGTCCACGT CGTCGCCGTG
TGCCAGCCGT CGGTGCCGGT GCTCGCCGCG GTGTCGGTGA TGGAAGCCAA CGACGATCCG
TTCGTGCCGC TGTCGATGAC GCTGATGGGC GGCCCGATCG ACACCCGGCG CAATCCGACA
TCGGTCAACA ATCTCGCCGC CGAAAAGGGC ATCGACTGGT TCCGCTCCCA CGTCATCACC
AAGGTGCCGT TCCCGCATCC GGGCGTGATG CGCGACGTCT ATCCGGGATT CCTGCAGCTC
AACGGCTTCA TCAGCATGAA TCTCGATCGC CACATGGACG CGCACAAGAA CCTGTTCAAT
CATCTGGTCC AGGGCGACGG CGACCTCGCC GACAAGCACC GCGAATTCTA CGACGAATAT
CTCGCGGTGA TGGACCTGAC TGCGGAGTTC TACCTGCAGA CCGTCGATCT GGTGTTCGTG
AAGCACGCGT TGCCGAAGGG CGAGATGACG CATCGCGGCA AGCTGGTCGA GCCGTCGAAG
ATCAAGCGCG TCGCGCTGAT GACCGTCGAA GGCGAGAACG ACGACATCTC CGGTCTCGGA
CAGACCGAAG CGACGCATAC GCTGTGCACT TCGATTCCGG ACGAGCGCCG CGTGCACTAC
GTGCAGAAGG GCGTCGGACA TTACGGCGTG TTCAACGGCT CGCGGTTCCG TTCGGAAATC
GTGCCGCGTA TTTCGGATTT CATGCTGTCG TCGGCGAGTG GCGCGCGCGC GACAGCCGCG
GAGTAA
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| Protein sequence | MPVIGEFGRP PEMPAEVSPA MTTPMYWFYE LAHASLNPAR AMSDAARLMF KNPLNPWSHT
DLGKSIAAAC EVFERTTRRY GKPEWGLDDT EVNGMRVPIE IHNVWEKPFC RLLYFERKLE
HPLRHPQPRV LIVAPMSGHY ATLLRGTVEA FLPTHEVYIA DWTDARMVPV AAGRFDLDDY
VDYVIEMLQT LGGNVHVVAV CQPSVPVLAA VSVMEANDDP FVPLSMTLMG GPIDTRRNPT
SVNNLAAEKG IDWFRSHVIT KVPFPHPGVM RDVYPGFLQL NGFISMNLDR HMDAHKNLFN
HLVQGDGDLA DKHREFYDEY LAVMDLTAEF YLQTVDLVFV KHALPKGEMT HRGKLVEPSK
IKRVALMTVE GENDDISGLG QTEATHTLCT SIPDERRVHY VQKGVGHYGV FNGSRFRSEI
VPRISDFMLS SASGARATAA E
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