Gene RPD_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0105 
Symbol 
ID4020561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp120724 
End bp121599 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID637960282 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_567246 
Protein GI91974587 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.452075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG TGCCGTTCAA TGCCGCAATG GTGCAGATGC GCACCGGGCT GTTGCCGGGG 
CCGAGCCTCG AACAGGCTAC CAAGCTGATC CGCGAGGCCG CCGCGGCCGG CGCCGACTAC
GTGCTCACAC CCGAGGTGAG CAACATGATG CAGCTCAACC GCGAGGCGCT GTTCGAGCAT
CTCGCCGATG AAGCCGACGA TGCGTCGCTG AAGGCCTATC GCGATCTGGC GCGCGAGTTG
AACATTCATC TGCATATCGG CTCGCTGGCG CTGCGCGCGA CGCCGGACCG CGCGGTCAAC
CGTTCGTTCC TGATCGATCC GTCCGGCGCC GTTCTGGCGA GCTACGACAA GATCCACATG
TTCGACATCG ATCTCGGCAA TGGCGAGAGC TACCGCGAAT CGACGAACTA CCAACCGGGC
GAATCCGCGG TGATCTCCGA TCTGCCGTGG GGCCGGATCG GGCTGACGAT CTGTTACGAC
GTCCGGTTTC CGGCGTTGTA CCGGGCGCTG GCCGAAGCCG GCGCGTCGTT CCTCACCGTG
CCGTCGGCCT TCACCCGGCC GACCGGCGAG GCGCATTGGC ATGTGCTGCT GCGCGCCCGC
GCGATCGAAA ACGGCTGCTT CGTGTTCGCC GCCGCGCAAT GCGGGCTGCA CGAGAACAGG
CGCGAGACCT ATGGCCACTC GCTGATCGTC GATCCGTGGG GCGTGGTGCT GGCCGAAGGC
GGCGTCGACC CGGGCTTCGT GATGGCGCGG ATCGATCCGG CCGCAGTTGC GAAAGCGCGC
GGCAAGGTGC CGTCGCTGCA GCACGGACGC CGCTTCACCG TGGTCGATGC CAAGCACAGC
CCGGAGCATC TGCATCTGGT CCGGGGCCAG ACATGA
 
Protein sequence
MTEVPFNAAM VQMRTGLLPG PSLEQATKLI REAAAAGADY VLTPEVSNMM QLNREALFEH 
LADEADDASL KAYRDLAREL NIHLHIGSLA LRATPDRAVN RSFLIDPSGA VLASYDKIHM
FDIDLGNGES YRESTNYQPG ESAVISDLPW GRIGLTICYD VRFPALYRAL AEAGASFLTV
PSAFTRPTGE AHWHVLLRAR AIENGCFVFA AAQCGLHENR RETYGHSLIV DPWGVVLAEG
GVDPGFVMAR IDPAAVAKAR GKVPSLQHGR RFTVVDAKHS PEHLHLVRGQ T