Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0084 |
Symbol | |
ID | 4020539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 100126 |
End bp | 100554 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960261 |
Product | hypothetical protein |
Protein accession | YP_567225 |
Protein GI | 91974566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.441837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0126856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC TGATCCTGAA GCCCTCGATG ATTTTCGCCG CCGTTCTGTC GCTCTCGGCC GCGCCCGCAT ACGCGCAGGG CACGGAGAGC CGGGCGGCGC TGCCGAAGCC CATGGCGATG CAGGTCGGCG ATGTTCTCAA CGGCGAACTC ACCGCGATGC GGTCGCGGGC GAACGGCAAG GGCAAGAAGA TCCCGGTGTA TCAGCTGACC AGCGAGCCGC GCCGGCTGCC GCCGCCGGCC GGTCTGTGCA ATCTCGAGAA CGGGCCGGAA ACGTTCCAGA TCGTGCCCGC CGGCGACGCC CAGGCGGCGC AGCTCAAATC GCATCTCGGC AAGCAGATTG CGCTGAAAGT CGAGGCGGTC GCCTGTGCCG AGGAGGCCGG GCAGTACAGC GAGGCCGTGG TGACGAAGTG GAGCATGGTC GCGAAGTAG
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Protein sequence | MTDLILKPSM IFAAVLSLSA APAYAQGTES RAALPKPMAM QVGDVLNGEL TAMRSRANGK GKKIPVYQLT SEPRRLPPPA GLCNLENGPE TFQIVPAGDA QAAQLKSHLG KQIALKVEAV ACAEEAGQYS EAVVTKWSMV AK
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