Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0080 |
Symbol | fmt |
ID | 4020535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 95609 |
End bp | 96541 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960257 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_567221 |
Protein GI | 91974562 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.450016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0632026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTC GCCTCGTCTT CATGGGTACG CCGGACTTCG CGGTGCCGAC GCTGCTGGCG CTGTCGGCCT ATGGTCACGA CATCGCCGCG GTCTACAGCC GCGAGCCCAA GCCGGCCGGG CGCGGCATGA AATTGCAGCA CAGCCCGGTG GCGCAGGAGG CGCAACGGTT CGGCATTCCG GTGCTGACGC CGAAAACGCT GAAGACCGAC GAGGCGCTCG CCGAATTCCG CAGCCATGAC GCCGACGCCG CGGTCGTGGT CGCCTATGGC ATGATCCTGC CGCAGGCGAT CCTCGATGCG CCCAGGCTCG GTTGCTACAA TCTGCACGGC TCGCTGCTGC CGCGCTGGCG CGGCGCCGCC CCGCTCAACC GCGCGATCAT GGCGGGCGAC GCCGAGAGCG GCGTGATGGT GATGAAGATG GACGCCGGCC TCGACACCGG CGACGTCGCG ATGGCCGAGC GGATCGCCAT CACCGACGCC ATGACGGTCA CCGATCTGCA CGATTCGCTG GCCCGGCTCG GCGCCGATCT GATGGTGCGG GCGATGGCGG CGCTGGAGCG CGATCAGCTG CAACTCACCC GGCAGAGCGA GCACGGCGTC ACCTACGCTG CCAAGATCGA CAAGGCCGAA GCCAAGATCG ATTTCGCGCG GCCTGCGCAG GCCGTGCTGC GGCACATCCA CGGGCTGTCG CCGTTTCCCG GCGCCTGGTG CGAACTGCCG ATCGACGGCG AAGCCGTGCG CGTCAAGATC CTGCGCTGTG CGTCGGCCAC CGGAGGCGGC GCGCCGGGGC AGGTGCTGGA CGACAGACTC ACCATCGCCT GCCAGGACGG CGCCATCCGG GTGCTGCAAT TGCAGCGCGC CGGCAAGCAG CCGATGCAGG CCGACGAGTT TTTGCGCGGT ACGCCGATCG CGGCGGGCGC AGTGATCGTC TGA
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Protein sequence | MPLRLVFMGT PDFAVPTLLA LSAYGHDIAA VYSREPKPAG RGMKLQHSPV AQEAQRFGIP VLTPKTLKTD EALAEFRSHD ADAAVVVAYG MILPQAILDA PRLGCYNLHG SLLPRWRGAA PLNRAIMAGD AESGVMVMKM DAGLDTGDVA MAERIAITDA MTVTDLHDSL ARLGADLMVR AMAALERDQL QLTRQSEHGV TYAAKIDKAE AKIDFARPAQ AVLRHIHGLS PFPGAWCELP IDGEAVRVKI LRCASATGGG APGQVLDDRL TIACQDGAIR VLQLQRAGKQ PMQADEFLRG TPIAAGAVIV
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