Gene RPD_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0063 
Symbol 
ID4020517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp73673 
End bp74686 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637960239 
Producthypothetical protein 
Protein accessionYP_567204 
Protein GI91974545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.171106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA GGCATTTTCT CAAGGGGCTG ATAAAACTAT CGACGCGCGA ACCATGGTCC 
GACCGGTTCG AACAGATTCT GGAAGACCAT CTGATACTCG CCTGCGACGA AACCGGCCTT
GAGATCGACG ATGTCGTCTC GACCATCGGC GAAGACCTGT TCATGAGCAC GGTATGGGCC
TGCGCTTTCG AGGACTTTCT GACCCGTGAA TTCGACGACG GCGAAAACGC GATCGACGAC
TATCTGAAGC GCCGGGGCTG GAAGGAGTCT GCGGCGGTCG TTACCTACAT GGCAGCGCTG
CGCAATTCGA CGATGAGCCT GTATGAAGTC AGCGACCTCG TCCCTGGCGC GTCGTTTCGG
GCGCGCGACC TTATCCGCGG AGGCGAGCCG GTCCTGATCA GCGAGCGGAG CGCTCTGCAG
GTGTACCCCG GGTTTCATTC GACTGGCGCG ACGTCGTGGA GCTGGGTTGC CGAGGGAAAG
CCGGCTCCGG CACGATCGGG TGCCGGCGAG TCATCGACAA AATCACTGAC CTTTGAGTCT
TGGCTGGACG ACGGCGCGCT CGTCCTCGGC GATATCCGGT TGGAGGACCA GTCTCTGGTA
CTCCGTGTCA ACTCGCGACA GCGTTCAGAC CGCGGTTGCG CGCTGCTGTC CGAGGTACTC
GGACCGCGCG TCGGCGCCCC CTCGGTCAAG ATGGAATCGG TCGAGCAAAT GATGGCCTCA
CGCGGCGTCG CCGCGCCAGA CCAACTCGAC ATCCCCGAAC AGGAGCAGTG CGCCATCATC
CATCGCTCCA TGGACCGGCA CTATCGCGAC GTGCTGGACC AACCGGTTGC CATGCTTGGG
GGAAAAACGC CGCGCGCAGC GGTCAAGACG AAGAGTGGAC GGACCAAAGT CGTCGATTGG
CTCAAGATGA TCGAAAACCA GTCAGCCAAA TCCGCGGACC CAAGCAGCCC AATGGCCAAT
TACGACTTCG GCTGGCTGTG GGCGGAATTG GGCATCAGCG AACTGCGGCG ATGA
 
Protein sequence
MASRHFLKGL IKLSTREPWS DRFEQILEDH LILACDETGL EIDDVVSTIG EDLFMSTVWA 
CAFEDFLTRE FDDGENAIDD YLKRRGWKES AAVVTYMAAL RNSTMSLYEV SDLVPGASFR
ARDLIRGGEP VLISERSALQ VYPGFHSTGA TSWSWVAEGK PAPARSGAGE SSTKSLTFES
WLDDGALVLG DIRLEDQSLV LRVNSRQRSD RGCALLSEVL GPRVGAPSVK MESVEQMMAS
RGVAAPDQLD IPEQEQCAII HRSMDRHYRD VLDQPVAMLG GKTPRAAVKT KSGRTKVVDW
LKMIENQSAK SADPSSPMAN YDFGWLWAEL GISELRR