Gene RPD_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0057 
Symbol 
ID4020511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp69012 
End bp69314 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content64% 
IMG OID637960233 
Producthypothetical protein 
Protein accessionYP_567198 
Protein GI91974539 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.594903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC TTTTGTTGTG CCCGAACGAC AATGGATCGA TGCAGACCGT GCAGCGGTCC 
GGAGTCGAGT TCGACATCTG CCCGACCTGC CGCGGCGTCT GGCTGGATCG CGGCGAACTC
GAAAAACTTC TGGCGGTGTC GCGCAGCGAC GATTCAGGCG ACGCGCAAGC CCACGCTCAG
CCCGTGCGCG ACGCGTTCAA CGCGCGACCG GCGCCGCGAT CCGAAGGTCG GCGCGAGTGG
GATGACGATG ACGATTATGG GCGCAAGAGG CGGCGCTCGA GCATCTTCGA CATCTTCGAC
TGA
 
Protein sequence
MMPLLLCPND NGSMQTVQRS GVEFDICPTC RGVWLDRGEL EKLLAVSRSD DSGDAQAHAQ 
PVRDAFNARP APRSEGRREW DDDDDYGRKR RRSSIFDIFD