Gene RPD_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0056 
Symbol 
ID4020510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp68026 
End bp69015 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID637960232 
Productintegral membrane protein TerC 
Protein accessionYP_567197 
Protein GI91974538 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.963752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTTCT TACTTCTCGA ATGGCTCGGC AAGCCCGCTT GGATGTGGTT GGGCTTTCTG 
GCGATCGTCG GCCTGCTGCT GGCGTTCGAT CTCGGCGTCC TGCATCGCAA GCAGAAAGAG
ATCGAGGTCG GCGAAAGTCT CGCGCTGTCC GCGGGCTATA TCGCACTCGG CACGGCGTTC
GCCGGTTTGG TCTGGTGGCA ACTCGGCGAA ACCGCCGGCA TCCAGTATCT GACGGGCTTC
GTCGTCGAGA AGAGCCTTGC GCTCGACAAC GTCTTCGTCA TCGCGCTGAT CTTCGGCTTC
TTCGCCGTGC CTCGCAAGTA TCAGCACCGC GTGCTGTTCT GGGGCATTCT CGGCGTGATC
GTGCTGCGGG CCATCATGAT CGGCATCGGC GCTACGCTGG TCGCGGAGTT CGCGTGGGTG
CTCTACCTGT TCGCCGCGTT TCTGATCCTG ACCGGGATCA AGATGCTCGT GATCGGCGAC
AAGGAGACCG ACCTCGCCAA GAATCCGGTT CTCAGGTTCA TCCGCCGCCG GTTCCGTGTC
ACCGACGCGC TGCATGGCGA GCGCTTCTTC GTCAAGCTGC CCGACCCCAA GACGGGGCAG
CTTGTGCGCT ATATGACGCC GCTCTGTCTC GCGCTGATCC TGATCGAGAT TGCCGATGTG
ATCTTCGCGG TCGATTCGGT GCCGGCGGTG TTCGCGATCA CCTCCGATCC CTACATCGTC
TACACCTCGA ACATCTTCGC GATCCTGGGC CTGCGTGCGC TCTACTTCGC GCTGGCGGCG
GTGCTTCACC GCTTCGCTTA CCTCAAGCAG GCGCTGGCCG TGCTGCTGAT CTTCATCGGC
GCCAAGATCT TCGTCGCCGA CCTGCTCGGA CTCGAGAAGT TTCCGGCCGC CTGGTCGCTC
GGCGCCACCT TCGCGATCCT CGCCGCCGGC ATCGCCTATT CGCTGTGGCG CACGCGCAAC
CCTGCCCCTC ACCTCAAAGG AGAAACATGA
 
Protein sequence
MDFLLLEWLG KPAWMWLGFL AIVGLLLAFD LGVLHRKQKE IEVGESLALS AGYIALGTAF 
AGLVWWQLGE TAGIQYLTGF VVEKSLALDN VFVIALIFGF FAVPRKYQHR VLFWGILGVI
VLRAIMIGIG ATLVAEFAWV LYLFAAFLIL TGIKMLVIGD KETDLAKNPV LRFIRRRFRV
TDALHGERFF VKLPDPKTGQ LVRYMTPLCL ALILIEIADV IFAVDSVPAV FAITSDPYIV
YTSNIFAILG LRALYFALAA VLHRFAYLKQ ALAVLLIFIG AKIFVADLLG LEKFPAAWSL
GATFAILAAG IAYSLWRTRN PAPHLKGET