Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0040 |
Symbol | |
ID | 4020494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 50548 |
End bp | 51813 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637960216 |
Product | thiolase |
Protein accession | YP_567181 |
Protein GI | 91974522 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG AAGTCTATGT GATCGGAACT GCCTGTACGC CGTTCGGCAA AAGGCCGCAG ACCAGCTTCA AGGCATTGAC CCGCGAGGCG TATCTTGCGG CACTGGCGGA CGCGGGGATG GCGGATGGAC GCGACATTGC GATGGCGTGG TTTGGAAACT GCGGCATGGG GACATTCGGA CAGCGCAATA TTCGCGGACA GGTCTGCCTC TCTCCGCTGG TGCGGGAGGG GCTGTTTCCC GAGCGCATCC CGACGATGAA TGTCGAAGGC GGCTGCGCGA CGGCCTCTCA GGCCCTGCAT GGCGCATGGA AGGACATCGC GTCGGGCGAC GCGCAGCTCT CGCTCGCCAT CGGCGTCGAG AAGACCTTCG TTCCGGACGA CCCGGCACGA ACGCAGGAGA TCTTCGACGG CGGGATCGAT CAGCTCGATC CCGGCGAATG GCTCGCCTAC TACCGCGACG CCGGCGAGGT CAGTGGCAAG CCGTTCCAGC CGGATGACAA GCGCGGCACC ATCTTCATGG ATACTTACGC CATGCAGGCG GCGTATCACA TGAAACGCTA CGGCACGACG CAGCGCCAGA TCGCGATCGG CGCGGCCAAG AACCATCATC ACGGAAGCCT GAATCCGCTG GCGCAATATC GGTTCACAAT GACGGCCGAT GAGGTCCTGG CCGATCGCCC GATCAGCTAT CCGCTGACCC GCAGCATGTG TGCGCCGATC GGCGACGGCG CCGCCGCCGC CCTGGTCTGC TCGAAGGACT ATCTTGCTTC ATTGCCGCGT GGGGTGCGGG AGCGGGCGGT GAAGATCAGG GCGAGCGCGA TGTCGGGCGG CAAGTATCGG TCGCTCGACG AGCCTGGGCT TTCGCGCATT GCCGCCGACA GGGCCTACAA AATGGCAGGG ATTTCGCCGT CGGACATCGA TATCGCCGAG GTTCATGACG CCACCTCGTT CTGCGAGATC TATCAGGTCG AGATGCTGCG CTTCTGCGCA GAAGGACAAG GCGGCGCCTA TGTCGCCTCA GGCGCGACCG CGCTCGGCGG CGATCGTCCG GTGAATCTGT CCGGGGGACT GGTCTCCAAG GGACATCCGG TCGGAGCCAC AGGTCTTTCG ATGATCCATG AGCTGGTGCT GCAGTTGCGC GGCGAGGCCG GCGAACGGCA GGCCAAGAAT GCGCGGCTGG CGCTGGCGGA AAATGGCGGC GGCGTCGTCG GCTTCGATGA AGCCGCCTGC GCGATCACGA TCCTGGAGAG GCTCGAGCCC AACTGA
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Protein sequence | MMPEVYVIGT ACTPFGKRPQ TSFKALTREA YLAALADAGM ADGRDIAMAW FGNCGMGTFG QRNIRGQVCL SPLVREGLFP ERIPTMNVEG GCATASQALH GAWKDIASGD AQLSLAIGVE KTFVPDDPAR TQEIFDGGID QLDPGEWLAY YRDAGEVSGK PFQPDDKRGT IFMDTYAMQA AYHMKRYGTT QRQIAIGAAK NHHHGSLNPL AQYRFTMTAD EVLADRPISY PLTRSMCAPI GDGAAAALVC SKDYLASLPR GVRERAVKIR ASAMSGGKYR SLDEPGLSRI AADRAYKMAG ISPSDIDIAE VHDATSFCEI YQVEMLRFCA EGQGGAYVAS GATALGGDRP VNLSGGLVSK GHPVGATGLS MIHELVLQLR GEAGERQAKN ARLALAENGG GVVGFDEAAC AITILERLEP N
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