Gene RPD_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0034 
Symbol 
ID4020488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp40087 
End bp40557 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID637960210 
Producthypothetical protein 
Protein accessionYP_567175 
Protein GI91974516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.184247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCA TCATCTGCAC CCGTAGCGTC CTGGAAAGGA CGATCTCCAT CATTCGACGC 
GACGGCAACC GCGGCGAAGA GCGGGTCGCG CTGTGGCTCG CGACCGCAGC CCAGCGCTCG
CCAGCAGCCA TCGTCGAGGT GTACGAACCT GAGCAGGTGG TCGAGGTCGA CTCCTTCTAC
ATCCCGCCCG CCTCGATGCG CGCGCTGATG AACCATCTCA GGTCGACGCG TCGGCGTATC
GCCGCGCAGA TCCACACTCA CCCCGGCCGC GCCTACCACT CCGACGCCGA CGCCAAGTGG
GCGATCATCC GTCACTCCGG TGCGCTCTCG CTTGTGTTGC CTCACTTTGC GAACGCCACG
ACCGTCGAGA ATTTCCTCGA AGAGGTCATG ACCTACGAAT ACTCGCCGGC GGGCGAATGG
ATCCATTGTC CCAACGTCGG CGCCGGCGCG CGTGTAGTGG TGACCGCATG A
 
Protein sequence
MSSIICTRSV LERTISIIRR DGNRGEERVA LWLATAAQRS PAAIVEVYEP EQVVEVDSFY 
IPPASMRALM NHLRSTRRRI AAQIHTHPGR AYHSDADAKW AIIRHSGALS LVLPHFANAT
TVENFLEEVM TYEYSPAGEW IHCPNVGAGA RVVVTA