Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0030 |
Symbol | |
ID | 4020484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 37697 |
End bp | 38431 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960206 |
Product | hypothetical protein |
Protein accession | YP_567171 |
Protein GI | 91974512 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.878438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCG TGGCGGCTGA AGACGCTCCC TTGGTACACT GGTCGGGGAG CGCTTATCGG CTGATCCCAT CCAGGTTTCC CCCGGTCAGC ATCTATGACG GGCTGATCGC CAGCGACCGG CAGGAAGAGC TCGTCGCGGT GGAGAACCTC ACCAACCCGC GCCTGCGTTC CCTCGGTCGC TTTCAGGAGG CGGGGAGCCC TGGACCTTGC GCTGATCCTA AGCTCCAGAA CTGGAATTTG GCGCCGTTCG CCTACGGCAA TCCGGACGGT AGTACGTTCT TCGGGGAAGA ACGACCGTGT CTCGAACTCG CCATGGAGCA ACAGACGGCG CTTGCCGTGT CGGTAGCCAA GCGGCAGGCG TTCATGGAAG CCACGAACGA GGCGCCCATC GGCCTCGATA TGAGGATGCT CTGTCATCCG GTGGACGGCA TCTTCTGGGA TCTGCGCGAC GTCCCCATTT CCTGGTCAGA GCTTGGCCAG GCCAAGCGCT ACGAACTCGG CGCCAAGATG CCGATAGGCG CTCAGGGTAT TCTGTTCCGG CCGGTCGAGC GGCCAACCGG CACGTGCCTG GTTGTCCTGA CCGGCGACAT CTTGCAGCGA TCCCAGCAGA CGGTCCATTT CCGCTTCGTC TGGGATGGCA AAAAGATCTC TCAGCTCTAC GTCTTCAACA ATGAAGGGAC GCGGATCGAC GCCGACAAGC TCGCCGGCCG AGAGGATGTG TTGGCGGCAA CCTAG
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Protein sequence | MPSVAAEDAP LVHWSGSAYR LIPSRFPPVS IYDGLIASDR QEELVAVENL TNPRLRSLGR FQEAGSPGPC ADPKLQNWNL APFAYGNPDG STFFGEERPC LELAMEQQTA LAVSVAKRQA FMEATNEAPI GLDMRMLCHP VDGIFWDLRD VPISWSELGQ AKRYELGAKM PIGAQGILFR PVERPTGTCL VVLTGDILQR SQQTVHFRFV WDGKKISQLY VFNNEGTRID ADKLAGREDV LAAT
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