Gene RPD_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0026 
Symbol 
ID4020480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp32426 
End bp33565 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID637960202 
Producthypothetical protein 
Protein accessionYP_567167 
Protein GI91974508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCG CTATCCAGAA GGGCAGCGTA GTTAGTCTTG AGACGGCCTT GCCTGCGAAA 
GCGAGCAAGC CTGCCGTGTG TGGGCAGCCC CGAAAAGGTC CCGAAGAAGA TGCGATGCGT
CCTCAGCCGA GACGCGACGT CAGATCGAAG AACCCGTCGC GAAATGCGCG AGCGGATAGG
TTGAAAGGCC TTAGCGACGT TGCCGTTCGG ACCGGCAAGC TGGCTGTGGC TGAACAGATG
TTCGACGAGT TGGTCGTCGC GTACTACAGC AAGGTCGAAG GCAACTTGAT GGTCGTGTAC
GGGTCGTCGG GCTCCGGCAA GACGCACGTA TTGAGACAGC TTCGCAAGGA TGAGGATCTC
CAACTGGACG AAACCGATCC GGAATGCGCC CGTCGCCCTC TGCTGATGAT CGAAGCACCG
TCCCCGTGCA CCTTGAAGAC GCTTGGTCTC GCAGTCCTAC AGGGCCTGGG CTATGAGGAG
GCCGGTTTCG CCAATCTCAG GGAGCATGAG GTCTGGCGTC GGGCGCGGGC GAACCTGTCC
AATCAGGGAA CGGGCATCTT GGTCATTGAC GAGATGCACA ACGTATTGGC GGGCCGCAGC
AACATGGAGT CCGTCAAGAT CGCGATGACG CTCAAGTCGT TGATGGTGTC GGAAGTTACT
CCGATCCAGA TCGTCATTTC GGGTCTCAAG ACGGTTCGGG ACTTTGCGGA GCACTTCAAA
GAGCTTCAGC GGCGGTCGCA ATTCCTAGAG ATGACGCCGC TGACGTCTCC CCGGGACGAC
AAAAAACTCG TTCTGTTTCT GGAAGGCCTT GAGAAGGAGC TCAAATTTCG GACCTGTGGG
TTCACCAGGC ACGACCTGCC CGTTCGATTC ATGATGGCGT CGCGCGGATT GATCGGCCGG
GTGGCGTATT TCGTAAAGAT GGCGGCCAAG TTGGCCATTA CTCTTGGAGA CGACGAGATC
AAGCAGGAGT ACCTAGGCAA GGTTTATGAG CGCATCTACC GCGTCAGTGC TAACCAGAAC
CCGTTTCTCA TGGCCAACGT TGCATCCTTC GTGATGCCGA GGGAAAAGGA AGCCGACGAA
TTGACGTTTG TTAGAGGCGT CAAGGAAGTG TCCAGAAGGA ATGGCGATGC TGCCGACTAG
 
Protein sequence
MSRAIQKGSV VSLETALPAK ASKPAVCGQP RKGPEEDAMR PQPRRDVRSK NPSRNARADR 
LKGLSDVAVR TGKLAVAEQM FDELVVAYYS KVEGNLMVVY GSSGSGKTHV LRQLRKDEDL
QLDETDPECA RRPLLMIEAP SPCTLKTLGL AVLQGLGYEE AGFANLREHE VWRRARANLS
NQGTGILVID EMHNVLAGRS NMESVKIAMT LKSLMVSEVT PIQIVISGLK TVRDFAEHFK
ELQRRSQFLE MTPLTSPRDD KKLVLFLEGL EKELKFRTCG FTRHDLPVRF MMASRGLIGR
VAYFVKMAAK LAITLGDDEI KQEYLGKVYE RIYRVSANQN PFLMANVASF VMPREKEADE
LTFVRGVKEV SRRNGDAAD