| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0025 |
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| Symbol | |
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| ID | 4020479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 29997 |
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| End bp | 32429 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637960201 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_567166 |
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| Protein GI | 91974507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGG AGCAGAGCTT CGAACCACAT GTGCCGTTGA TCCGGCTGCA CAAAAACGAT
CAAGTAGTGA TCGACGAGGT CTGGTATCGG GAGACACACA GAACGAAGCA CGCCGTCACG
CTGCATCCGA TCGGCGGGAC GCTTCCGCGC GTCTTCACCG GCCGGCAGCT CCGGGAGCTT
TACTTCGATC CTGCCAAGCG GATGAGGATC GTGCGCGGCC CCAACGAGAA GCTTGATCCC
GAAGTTGCCG CTGCGGCGTC CCGTCCCTTC GAGAGCTTCA GCGCCGGACA ACAGGCGGAG
ATGCTGAAGC GGTACGATTA CGTCCTGGCA TGCGACCGGT TCTTTGCGCG CAAGCTGTTT
ACCAAGCGTC CAGAGACCGG CTATGCGCGC ATTGCCGAGA TCGTCGCGCG CTATCGCCGC
TTGGTGCGGG CCCATCAGGA AAACCGTCCT TCGTGCAGAT TCGATCTCGA GACCGTCGGC
GGCTCGACGC TTCGGGATTG GTACGGGCGG TGGCTGCATT CGGGGCGCCA GCTAGGTGCG
CTGGCGCCAC TGCTTCACAG TCGTGGCAGC AAGGAAAAGA AGATGGACCC CGCAGTCCGA
GCGCTGATCG CCGACTGCGT GAATGAGAAG TACCTGACGG CGGAGGCGCC GCCGCTCACG
GTGGTCTGGG ACTACATCTG CGGCAGGATC GACGATCTGA ACGAGGACGG CAGGCACGCG
CTCGCGAAGC CGAGCGAAAT GGCGGTTCGG CGCTGGATCA AGGACAATGT TGATCCGTTC
ACGGAAGTTT TCTACCGCAA GGGGCGCAAG AAGGCGACTC ACCAGTTCCG ACTGACCAAC
AACGCGCCCT TGGCGACCCG TCCGCTGCAG ATCGTCGAGT TCGACGAGAC TCCTCTCGAC
ATCATGCTGG TGGACGACAA CGGAAAGAAT CCCCGGCGAG CGGTCCTGAC GGCCGGCATT
TGCGTCGCGA CCGGCATGAT CGTGGGTTGG CACATCGGCT ATGAGCATCC GAGTTGGGTG
ACGGTGATGA AGGCACTGCG AATGGCAGTG CTGGCCAAGG ACACCTCGGG CAGCGGCGCG
GAGTCGCCCT ATCCGGTGTA CGGCGTTCCA GAGATGATCA AGGTTGATAA TGGTCCGGCG
TATCGCTCGC ACTCGCTGGT CGCGGCTGCC GGACAGCTTC AATTCGAGAT TCGGCTATGT
CCGGTCGCCA AGCCGAATCT GAAGGGCAAA GTGGAGCGGT TCTTTCGAGA GGTGACGCGG
GATTTTCTCA GCATCTTCCC AGGCAGGACC TTCTCGAACA TCCAGGAGCG GGGCGACTAC
GATTCGGAGG GCAACGCGCG GATGACGCTG CAAACTGTGC AGCGGCTGTT CACGCGTTGG
GTCGTTGACA TTTATCACAA CCGGCCCAAC AGCCGCTGTT TCGGTCAGAC GCCTTTGGAA
CGGTGGGAGG CTTTGTCGGG CTTCGGCGTC CGCGTTCCGC CCCAGTCGGA TGACTTGACG
CCGCTGATTG GTTTGATCGT CAACCGCACC ATCCAAGCGG ACGGCATCAC GTTCATGGGG
CTGACCTATC GGGACGCTGC GCTGAAGTTG ATGCGGCAGA AGAGCCATAT GGGCCGGGAG
TGGATGGTGA AGATCGATCC GAACGATCTT CGTTGGATCT ACATTCTGAA CGACGAGGCC
CAGTGCTGGG TGAGGGCCGG GTGTCAGAGG GCTGATCTGA TCGAGGGGCT GTCGCTGAAG
ATGTGGATGG AGGTCGTCAA GGCGGCGAAG GAGGCTACGG CGGCCAGGCA GCGGGTTTCC
ATTGCGACGC TTCGAAGGGC GCGTGTGGCG CTGCTGCGAG AGGCCGAGGC GATGGGGAAC
AAGCCGCACG GCAAGATCAC CGCCCGGGAC CAGATGTGGA TCGAAGCCAA CATGAATCAG
CCGGCCTACC TGATTTCGGT CGATCCCGAC GAGCTGGATG CAATGCCGAA TCGCATGCTG
CCTAGGCGTC GGGCGAAACC CGCAGAGAAC GAAGCCAAGC GCGATCCATC CATGGTTGAA
CCTGCCTCGC GGGCTGGCGG CCATCCAATC GCGGATCAGG ATTTGCCCGA CGCGCCGTTA
GACGTGGCGG AGCGCGAATT GGACGATGAA GTTCGAGAGC AACAAGAACG CGATGATCTT
CGGCAATGGC GGAAGCGCGC GGCTGCGCTG TCGTCGGCAG TTTCAACGAC GCAGAAAACT
GATGCGCAAC CTTTAAGAAC TGTGACAGAG GCCGCCCCGC CCATCATTCC GGATCAGCAG
GAAGACGTTT CCCAAGCTCG CCAAGAAGCG CCCGTCGGCG CTTTCGAACG GCTGGCCACG
GCGGCGTGCA CGCGCACGCC GACGCGATTG GCAGATGAAG ACGACATCGA ATCCTGGAAT
CCGAACAACG ACCAGAAGGA GATCGACCAA TGA
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| Protein sequence | MSMEQSFEPH VPLIRLHKND QVVIDEVWYR ETHRTKHAVT LHPIGGTLPR VFTGRQLREL
YFDPAKRMRI VRGPNEKLDP EVAAAASRPF ESFSAGQQAE MLKRYDYVLA CDRFFARKLF
TKRPETGYAR IAEIVARYRR LVRAHQENRP SCRFDLETVG GSTLRDWYGR WLHSGRQLGA
LAPLLHSRGS KEKKMDPAVR ALIADCVNEK YLTAEAPPLT VVWDYICGRI DDLNEDGRHA
LAKPSEMAVR RWIKDNVDPF TEVFYRKGRK KATHQFRLTN NAPLATRPLQ IVEFDETPLD
IMLVDDNGKN PRRAVLTAGI CVATGMIVGW HIGYEHPSWV TVMKALRMAV LAKDTSGSGA
ESPYPVYGVP EMIKVDNGPA YRSHSLVAAA GQLQFEIRLC PVAKPNLKGK VERFFREVTR
DFLSIFPGRT FSNIQERGDY DSEGNARMTL QTVQRLFTRW VVDIYHNRPN SRCFGQTPLE
RWEALSGFGV RVPPQSDDLT PLIGLIVNRT IQADGITFMG LTYRDAALKL MRQKSHMGRE
WMVKIDPNDL RWIYILNDEA QCWVRAGCQR ADLIEGLSLK MWMEVVKAAK EATAARQRVS
IATLRRARVA LLREAEAMGN KPHGKITARD QMWIEANMNQ PAYLISVDPD ELDAMPNRML
PRRRAKPAEN EAKRDPSMVE PASRAGGHPI ADQDLPDAPL DVAERELDDE VREQQERDDL
RQWRKRAAAL SSAVSTTQKT DAQPLRTVTE AAPPIIPDQQ EDVSQARQEA PVGAFERLAT
AACTRTPTRL ADEDDIESWN PNNDQKEIDQ
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