Gene RPD_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0022 
Symbol 
ID4020476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp27805 
End bp28395 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content62% 
IMG OID637960198 
Producthypothetical protein 
Protein accessionYP_567163 
Protein GI91974504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.842797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTTC ATCCCAAAGC GCGCGCGAGC GCCCATCAGT TCTTCGTTTC CGCGAAAACA 
CGTACCGCGA TTCCGACACG CCATTCCCTA GTTCGCGAAG CGCTAGTGCA AGCCTCGCTC
GATCCGCTGG TTCGGGACAT CGGATTCGTT CCGTCGGCGC GAGTCGCCGC GGCGCAGGTA
GCTCTTGAGG CCGTCGTCAT CGTGCGCGAC GACGGACAGT TCTATCTCGA CATCGTGCCA
GGGCGCCCAC TTCGCGACGC GGAAGCGGAG GGCCTCATGC TGAGCGCACT GGACGAGCTT
AGGCTGGCCC CGCTGACGAT CACAGAGGAG GACATTCGCC GGCAGCCGCG CTACACGAAC
GCGCGGACCG TCTGGCATTA CCAGTCAACT GCGGTTGGCA TCGGGATGCG AATGCGCATC
CAGCGAATTT TGATCGACGC CGGGCCTATG AGGCTTGGCG ATTTGCTCAT GCGGGACTGG
TGTTCGGACC CCCGTCCCGC CGTTATGTCG TTGGCCTGCC AGGATCTCCT GGAACTCAAC
CTGATGACCG AACCCCTTGG GCCACAGACC ATTGTTAGGT GTCGCTCATG A
 
Protein sequence
MFVHPKARAS AHQFFVSAKT RTAIPTRHSL VREALVQASL DPLVRDIGFV PSARVAAAQV 
ALEAVVIVRD DGQFYLDIVP GRPLRDAEAE GLMLSALDEL RLAPLTITEE DIRRQPRYTN
ARTVWHYQST AVGIGMRMRI QRILIDAGPM RLGDLLMRDW CSDPRPAVMS LACQDLLELN
LMTEPLGPQT IVRCRS