Gene RPD_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0011 
Symbol 
ID4020465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp12201 
End bp13025 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID637960187 
Producthypothetical protein 
Protein accessionYP_567152 
Protein GI91974493 
COG category[S] Function unknown 
COG ID[COG4328] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCA CCTTCATTGG ATTTGACTCG GCCTGGACGG ACAATCCGAA GCGTCCGGGA 
GCAATCTGTT CGATCGACTA TGATGGCAGC GAGTTTAGTG AATTCAGAGG GCCGACGCTT
GTCGGTTTCA AGCAGGCGCT GGAATTTATT CAATCCGCCT ACGACGCCAA TCGACTTACG
CTTGTTGCTG TTGATCAGCC AACTATCGTC AACAATCTTA CGGGAATGAG GGCGGCAGAA
CGAGTCGCCG CAGCGGCTGT GTCTTGGCTC GGCGGGGGAG TCCAGCCGGC GAGCCGATCA
AGATCAGGCA TGTTCGACGA CAATGCCCCG ATATGGAAAT TTCTGCGTGA ACTCGGCGCA
TGCGACGACC CCGAGCGATG CAAAGCCAGT CGAGACGGAC TATTCATTAT GGAAGTCTTT
CCGGCCCTGG CCCTTCCTGC ATTTCATCCC GGCTTTTGCG GCCGCTTGTC CGCGCCGCGA
TACAACCCGG CGCGGTCTAA GACATTTCGC CAATCGGACT GGGAAAAGGT GACAAAGGTT
GTCGGCGAAC AGGTGGACGC AATGCAGTGT CCTTCCTTCA ACGATTGGTG CGCCTCATTG
TCGTCCGTTC CGAAGCCGAA AAAATCGGAC CAGGACAAAT TGGACGCCTC GATCTGCTTG
TTGATCGCAC TCCACTGGAT GGTCCAACCC CGCGAATCGT CAGTGATGAT TGGGGACCTG
ACTTCCGGGT ACATCGTGGC ACCGGTGGTG GATGAGATAA GACGACGACT GACAGATAAG
GCAAGGTCGG AATACGTGGC GATCGACGGG AAAATTCCCG GGTAG
 
Protein sequence
MKATFIGFDS AWTDNPKRPG AICSIDYDGS EFSEFRGPTL VGFKQALEFI QSAYDANRLT 
LVAVDQPTIV NNLTGMRAAE RVAAAAVSWL GGGVQPASRS RSGMFDDNAP IWKFLRELGA
CDDPERCKAS RDGLFIMEVF PALALPAFHP GFCGRLSAPR YNPARSKTFR QSDWEKVTKV
VGEQVDAMQC PSFNDWCASL SSVPKPKKSD QDKLDASICL LIALHWMVQP RESSVMIGDL
TSGYIVAPVV DEIRRRLTDK ARSEYVAIDG KIPG