Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0011 |
Symbol | |
ID | 4020465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 12201 |
End bp | 13025 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637960187 |
Product | hypothetical protein |
Protein accession | YP_567152 |
Protein GI | 91974493 |
COG category | [S] Function unknown |
COG ID | [COG4328] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCA CCTTCATTGG ATTTGACTCG GCCTGGACGG ACAATCCGAA GCGTCCGGGA GCAATCTGTT CGATCGACTA TGATGGCAGC GAGTTTAGTG AATTCAGAGG GCCGACGCTT GTCGGTTTCA AGCAGGCGCT GGAATTTATT CAATCCGCCT ACGACGCCAA TCGACTTACG CTTGTTGCTG TTGATCAGCC AACTATCGTC AACAATCTTA CGGGAATGAG GGCGGCAGAA CGAGTCGCCG CAGCGGCTGT GTCTTGGCTC GGCGGGGGAG TCCAGCCGGC GAGCCGATCA AGATCAGGCA TGTTCGACGA CAATGCCCCG ATATGGAAAT TTCTGCGTGA ACTCGGCGCA TGCGACGACC CCGAGCGATG CAAAGCCAGT CGAGACGGAC TATTCATTAT GGAAGTCTTT CCGGCCCTGG CCCTTCCTGC ATTTCATCCC GGCTTTTGCG GCCGCTTGTC CGCGCCGCGA TACAACCCGG CGCGGTCTAA GACATTTCGC CAATCGGACT GGGAAAAGGT GACAAAGGTT GTCGGCGAAC AGGTGGACGC AATGCAGTGT CCTTCCTTCA ACGATTGGTG CGCCTCATTG TCGTCCGTTC CGAAGCCGAA AAAATCGGAC CAGGACAAAT TGGACGCCTC GATCTGCTTG TTGATCGCAC TCCACTGGAT GGTCCAACCC CGCGAATCGT CAGTGATGAT TGGGGACCTG ACTTCCGGGT ACATCGTGGC ACCGGTGGTG GATGAGATAA GACGACGACT GACAGATAAG GCAAGGTCGG AATACGTGGC GATCGACGGG AAAATTCCCG GGTAG
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Protein sequence | MKATFIGFDS AWTDNPKRPG AICSIDYDGS EFSEFRGPTL VGFKQALEFI QSAYDANRLT LVAVDQPTIV NNLTGMRAAE RVAAAAVSWL GGGVQPASRS RSGMFDDNAP IWKFLRELGA CDDPERCKAS RDGLFIMEVF PALALPAFHP GFCGRLSAPR YNPARSKTFR QSDWEKVTKV VGEQVDAMQC PSFNDWCASL SSVPKPKKSD QDKLDASICL LIALHWMVQP RESSVMIGDL TSGYIVAPVV DEIRRRLTDK ARSEYVAIDG KIPG
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