| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0004 |
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| Symbol | gyrB |
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| ID | 4020458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4985 |
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| End bp | 7426 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960180 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_567145 |
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| Protein GI | 91974486 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC CCGCCCGGCA GCCGATCGCC GAAACCCCGC CTTCCGTTCC GGCCGAATAC
GGCGCGGAAT CGATCCGGGT GCTGAAGGGC CTCGACGCCG TGCGCAAGCG GCCGGGCATG
TATATCGGCG ACACCGACGA CGGGTCCGGC CTGCACCACA TGGTGTACGA AGTCGTCGAC
AACGCCATTG ACGAGGCGCT GGCCGGCCAC GCCACCGCGG TTGAAGTGGT GCTGAACGCC
GACGGCTCAG TGACGGTGCG CGACGACGGT CGCGGCATTC CGGTCGACAT CCACAAGGGC
GAAGGCATTT CCGCGGCCGA GGTCATCATG ACCCAGCTGC ACGCCGGCGG AAAATTCGAC
CAGAACTCCT ACAAGGTGTC CGGCGGTCTG CACGGCGTCG GCGTCTCGGT GGTCAACGCG
CTGTCGAGCA AGCTGATCCT GCGGGTCTGG CGCAACGGCA AGGAGCACAT CATCGAATTC
GCCCATGGCG ACGCGGTGGC GCCGCTCAGC ATGGTCGGCG ACGCCAATGG CCGGCGCGGC
ACCGAGGTGA CGTTTTTTGC ATCGCCGGAA ACCTTCACCC ACATCGAATA TGACTTCGCC
ACGCTGGAGC ATCGGCTGCG CGAGCTCGCC TTCCTGAATT CCGGCGTCAA CATCGTGCTG
TCCGACATGC GTCACGCGGT CGAGAAGCGC GAGGAGATGC GCTACGAGGG CGGCGTCACC
GAATTCGTGA AGTATCTCGA CCGCAACAAG AAGCCGATCG TGCCCGCGCC GATCGTGCTC
GCGGCCGATC TCAACGGCAT CGGCGTCGAA GTCGCTTTGT GGTGGAACGA GACCTACCAC
GAGAACGTGC TGTGCTTCAC CAACAACATC CCGCAGCGCG ACGGCGGCAC GCATCTGGCC
GGCTTCCGCG CCGCGCTGAC CCGGCAGGTC AACGGCTACG CAGATTCCAA CGCCAAGAAG
GAAAAGATCG CGCTGACCGG CGACGATTGC CGCGAGGGGC TGACCGCGGT GCTCTCGGTG
AAAGTGCCGG ACCCGAAATT CTCGTCGCAG ACCAAGGACA AGCTGGTGTC CTCGGAAGTG
CGCCCGGTGG TCGAGAACGT GCTGAACGAA GCGCTCGCAG CATGGTTCGA GGAGCATCCG
TCCGAAGCGA AGGTGATCGT CGGCAAGGTG ATCGAGGCCG CCGCCGCCCG CGAAGCCGCG
CGAAAAGCGC GCGAGCTGAC GCGGCGCAAG GGCGCGCTCG ACATCGCCTC ATTGCCCGGC
AAGCTCGCCG ACTGCCAGGA ACGCGATCCG TCGAAATCCG AACTGTTCAT CGTCGAGGGT
GACTCCGCCG GCGGCTCCGC CAAGCAGGGC CGCAACCGCG AATTCCAGGC CGTGCTGCCG
CTGCGCGGCA AGATCCTGAA CGTCGAGCGC GCGCGCTTCG ACAAGATGCT CGGCTCCGAG
CAGATCGGCA CGCTGATCAC CGCGCTCGGC ACCGGCATCG GCCGGGACGA TTTCGATCTG
TCGAAGCTGC GCTACCACAA GATCATCCTG ATGACCGACG CCGACGTCGA CGGCGCGCAT
ATCCGCACGC TGCTGCTGAC GTTCTTCTTC CGGCAGATGC CGGCGCTGAT CGAGGGCGGC
TTCCTCTACA TCGCGCAGCC GCCGCTCTAC AAAGTGACGC GCGGCAAGTC GGAGCAGTAT
CTCAAGGACG AGCGCGCGCT CGAGGACTAT CTGATCTCGA CCGGGCTCGA CGACTGCATC
TTCCGCCCCG CCAGCGGCGA GGAGCGCTCC GGCCGCGACC TGCTGGCGCT GGTCGAGAAC
GCCCGCATCG TCCGCGGCAC GCTGCACAAT CTGCACAGCC GCTACAACCG CTCGGTGGTC
GAGCAGGCGG CGATCGCCGG CGTGCTCAAT CCGAGGATCA CCAGCGACAT CCCCACCGCC
AATGAGGCGG CGGCCTACAT CGCGCGCCGG CTCGACGCGC TGGCCGACGA AGTCGAGCGC
GGCTGGGTCG GGCGCTTCAC CGAGGGCGAG GGCTTCAGCT TCGAGCGCAC CGTGCGCGGC
GTGAAAGACG TCGCGATCAT CGACGACGCG CTGCTCGGCT CGGCCGACGC CCGCAAGCTC
GACGAATACG CCGCGATTCT GCAGGAAGCC TATCCCCGCC CCGGCGTGCT GCGGCGGAAG
GACACCGAGA CGGCGATCCA TGGCCCGGTC AGCCTGTTCG AGGCCGTGAC CGACGCCGGC
CGCAAGGGCG TCTCGCTGCA GCGCTACAAA GGCCTCGGCG AGATGAACCC GAGCCAGCTC
TGGGAAACCA CGCTCGACAC CAACGCCCGC TCGCTGCTGC AGGTCAAGGT GCGCGAAGTC
GACGAAGCCG ACGACCTCTT CACCAAGCTG ATGGGCGACG TCGTCGAACC CCGCCGCGAA
TTCATCCAGG AGAATTCGCT GAGCGCCACG GTGGACGTGT AG
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| Protein sequence | MTEPARQPIA ETPPSVPAEY GAESIRVLKG LDAVRKRPGM YIGDTDDGSG LHHMVYEVVD
NAIDEALAGH ATAVEVVLNA DGSVTVRDDG RGIPVDIHKG EGISAAEVIM TQLHAGGKFD
QNSYKVSGGL HGVGVSVVNA LSSKLILRVW RNGKEHIIEF AHGDAVAPLS MVGDANGRRG
TEVTFFASPE TFTHIEYDFA TLEHRLRELA FLNSGVNIVL SDMRHAVEKR EEMRYEGGVT
EFVKYLDRNK KPIVPAPIVL AADLNGIGVE VALWWNETYH ENVLCFTNNI PQRDGGTHLA
GFRAALTRQV NGYADSNAKK EKIALTGDDC REGLTAVLSV KVPDPKFSSQ TKDKLVSSEV
RPVVENVLNE ALAAWFEEHP SEAKVIVGKV IEAAAAREAA RKARELTRRK GALDIASLPG
KLADCQERDP SKSELFIVEG DSAGGSAKQG RNREFQAVLP LRGKILNVER ARFDKMLGSE
QIGTLITALG TGIGRDDFDL SKLRYHKIIL MTDADVDGAH IRTLLLTFFF RQMPALIEGG
FLYIAQPPLY KVTRGKSEQY LKDERALEDY LISTGLDDCI FRPASGEERS GRDLLALVEN
ARIVRGTLHN LHSRYNRSVV EQAAIAGVLN PRITSDIPTA NEAAAYIARR LDALADEVER
GWVGRFTEGE GFSFERTVRG VKDVAIIDDA LLGSADARKL DEYAAILQEA YPRPGVLRRK
DTETAIHGPV SLFEAVTDAG RKGVSLQRYK GLGEMNPSQL WETTLDTNAR SLLQVKVREV
DEADDLFTKL MGDVVEPRRE FIQENSLSAT VDV
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