| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_2411 |
|---|
| Symbol | |
|---|
| ID | 3999001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 2536238 |
|---|
| End bp | 2537479 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637960141 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_567012 |
|---|
| Protein GI | 91774320 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000356758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TAATCCTTGT ACAGAGAAAT GAGCCTGGTA CTGATCATGG TACAAATGAG
AGAAAGTTTG TCGAGCTTAA GGAACTGGCA AGAGCTGCGC ATTACAATGT AGTGGGTGTG
CTGACACAGA CACGTTATCC TGATCGCAAG TATCAGGTGG GTAGGGGGAA GGTCGATGAA
CTGGCGGAGC TTGTAGAGGC ATTGGATGCT GAAAAAGTGA TTTTCAATCA CCAATTGTCA
ACTACACAGA TCTATAATAT CTCTGAGACC TGCAAATGTG AGGTAATTGA CAGGTTCAAT
CTGATCCTTG AGATATTCGC ATCAAGGGCT ACTACAAGGC GTGCAAAATT ACAGGTGGAA
CTTGCAAAGT TGCAGTATGA GTTGCCAAAA GCAAGGGCTA TAGTTTCTTT GCTTAAGAAG
GACGAACGTC CTGGGTTCAT GGGTCTGGGT GGCTATGAGG ATTCCTATGA GCAGGATGTT
AAGAAAAGAA TAGTCCGGAT AAGGAACGAA ATTCATAATT CTTGTAAGGG AGGTGAGTCT
CTTCGCTCTT TCAGACATGA AAGGGGTTTT TCCCTCGTTG CTCTGGCAGG TTATACGAAT
GCAGGTAAAA GCACTCTGTT CCAATCGCTT GTGAAAGAAG GGGTGGAAGT TGAAGACATG
TTATTCACTA CCTTGTCCCC GACTACACGC TCCCTTTCAA TAAAGCAAAG ACGTGTGCTT
CTTACAGATA CGGTTGGCTT TATTGAGGAC CTTCCTCATT GGATGGTCGA TGCATTTCGT
TCTACACTTG ATGAGATATT TCTCGCGGAT GTTATTCTCC TTGTAGTGGA TATGAGTGAT
CCCTTGGATG TGATAAGGCA AAAACTTGTA GTAAGTCATG ACATTTTCTG GAAGCGCACC
GAAGGGGCAG AAATAGTTGC TGTTTTGAAC AAGGCCGATA TGGTCGATCC AGATGACCTC
GAAAGGAAAG TTGATGCGAT AAGTTATCTT GCCCCTCATC TTGTACTGGT TTCTGCAAGT
TCTGGTGATG GGTTTGAAGT GCTTTTGGAT ACGATATATG AGAATTTACC TCATTGGTCT
CGTTCCAGTA TATCTTTGGA TATGTCTGAA GATAGTCTCT CTATTGTATC ATGGTTGTAT
GATGAAGGTA TAGTTCATAG TATTGATTAC GGTGAATATA TCGTTCTGGA GGTCGAAGCT
CGGGAAGAGA TATTAAGAAA AGTTCGTAAA TATAGTATAT GA
|
|---|
| Protein sequence | MKKVILVQRN EPGTDHGTNE RKFVELKELA RAAHYNVVGV LTQTRYPDRK YQVGRGKVDE
LAELVEALDA EKVIFNHQLS TTQIYNISET CKCEVIDRFN LILEIFASRA TTRRAKLQVE
LAKLQYELPK ARAIVSLLKK DERPGFMGLG GYEDSYEQDV KKRIVRIRNE IHNSCKGGES
LRSFRHERGF SLVALAGYTN AGKSTLFQSL VKEGVEVEDM LFTTLSPTTR SLSIKQRRVL
LTDTVGFIED LPHWMVDAFR STLDEIFLAD VILLVVDMSD PLDVIRQKLV VSHDIFWKRT
EGAEIVAVLN KADMVDPDDL ERKVDAISYL APHLVLVSAS SGDGFEVLLD TIYENLPHWS
RSSISLDMSE DSLSIVSWLY DEGIVHSIDY GEYIVLEVEA REEILRKVRK YSI
|
|---|
| |