Gene Mbur_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2400 
Symbol 
ID3998988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2523812 
End bp2525461 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content41% 
IMG OID637960128 
Producttype II secretion system protein E 
Protein accessionYP_567001 
Protein GI91774309 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACA AGACCCTGCT AAACAAAGAG GATAATACTC GTGAAAAGAG TCTTAGATCA 
ATCTATAAAA AATTGAAAGT ATGGGGTCGT AGCCTCCCTG AGCTTGAGCC ATATCAACTT
CAAATACATG GGGATATTGT GGAATATACG ATTCCTCCCG GATTCCGGGA AATTGAAAGG
TACTGGGTGG ACGAGCCTTT TGCTTTTATA AGCATTCTTG AAAAAAATGG TGTGAGGGAA
TATTACCTTA TAGAACCGGT TCTTTCTGTC TATGAAAAAG AAGTGTTGGA ACGCGTCTAC
AGTGACCTGC ATGAAATTCT GACAATCGAA GACACAGGAC CTGATATTGA TAGGGAATAT
GTTCTTGTGA ACAAGACCCT CTATCTTTTT GATCTTTATA AGGCTGAACT TGCTACAGCC
TCAAAGCACA AGATCTTATA TTATCTCAAA AGAAATTATC TTGGCTTTGA TTCGATCAAT
GGACTTATGC TTGACTCCTT TATAGAAGAT ATCTCATGTG ATGGTATTGA GGTCCCTATT
TTTCTTTATC ATTCCAAATA CCGAAATATC AAGACAAATA TATCATTTGA AGAAAGCAGA
CTAAATTCAT TTGTTATTAA TTTGTGTCAG AAAAGTGGGA AACATATCTC TATAGGCGAT
CCTATGATCG ATGCCACTTT ACCTGATGGT TCAAGATTGC AAGCAACCCT TGGAAAAGAG
ATTACCACAA GGGGCAGTTC ATTTGATATA CGCAAGTTCA AATCCGATCC TATAACTCCT
ATCGATCTGT TGGAATTCGG CACATGTAGT TCAGAAATGC TGGGGTATTT CTGGCTCGCG
ATTGAAAATG GTTTTAGTGC AATATTTGCC GGTGGGACTG CATCAGGTAA GACCTCGCTT
CTTAATGCTG TATCACTTTT CATTCCTCCC CTTTCAAAGA TCGTATCGAT CGAGGATACT
CGTGAAGTAA TGCTCCATCA CGATAACTGG ATTGCGGGAC TTACGCGTGA ATCTGTTACG
GATTCTGGTG CAGGGGAGGT CACAATGTTC GATCTCTTAA AAGCATCATT GAGGCAGCGC
CCCGAATCTA TTCTTGTGGG TGAAGTAAGG GGCAAAGAAG CATTGACCCT TTTTCAGGCG
CTATCTACTG GTCATACGAC CTACTCGACG ATGCATGCAG GCGATGTGCA AACAGTTGTA
AATCGTCTTG AGAACGAACC CATTAATGTA CCGCATGTGA TGCTTCAGGC TCTTGATCTG
CTTTGCATAC AGAAGCTTGT TTTCCTTGGA GATAAAAAGG TAAGAAGGAC TAATTCAGTG
GTCGAATTTG CAGGTATTGA TCCGAAATCC GGGTATATTC GAATAAATGA GCTCTATACA
TGGGATCCGG CAACTGATGA TTTCAAACGT ATGGCTGAGT CTCATATATT GAAAAAGATA
ATGCAGAGAC GTGGCTGGGG TGGAGTGAAA CTGAAGGAAG AACTCAATGA TCGTATTAGA
TTACTTGAGT ATTTGCGAGA TGCCGGGATC CGTGATTACG TAAATGTTTC AGTCCTTGTG
GGTATGTACA TAATTGATCC ACGGTCAGTA ATAAGTTCCA TGGAAGATGG AACGTTGGCT
GACAAGATAC AGGCTCATAA TAAGGAATAA
 
Protein sequence
MPDKTLLNKE DNTREKSLRS IYKKLKVWGR SLPELEPYQL QIHGDIVEYT IPPGFREIER 
YWVDEPFAFI SILEKNGVRE YYLIEPVLSV YEKEVLERVY SDLHEILTIE DTGPDIDREY
VLVNKTLYLF DLYKAELATA SKHKILYYLK RNYLGFDSIN GLMLDSFIED ISCDGIEVPI
FLYHSKYRNI KTNISFEESR LNSFVINLCQ KSGKHISIGD PMIDATLPDG SRLQATLGKE
ITTRGSSFDI RKFKSDPITP IDLLEFGTCS SEMLGYFWLA IENGFSAIFA GGTASGKTSL
LNAVSLFIPP LSKIVSIEDT REVMLHHDNW IAGLTRESVT DSGAGEVTMF DLLKASLRQR
PESILVGEVR GKEALTLFQA LSTGHTTYST MHAGDVQTVV NRLENEPINV PHVMLQALDL
LCIQKLVFLG DKKVRRTNSV VEFAGIDPKS GYIRINELYT WDPATDDFKR MAESHILKKI
MQRRGWGGVK LKEELNDRIR LLEYLRDAGI RDYVNVSVLV GMYIIDPRSV ISSMEDGTLA
DKIQAHNKE