| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_2397 |
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| Symbol | |
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| ID | 3998985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 2520012 |
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| End bp | 2521100 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637960125 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_566998 |
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| Protein GI | 91774306 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000041762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTACAT CCAAGAGAAA GATCGAACAC CTTGAACTTT GTGCAAAACG TCCGGTGGAA
TCCAGGAACG TAACATCCGG ATTCGATGAT GTTATGCTTA TTCACAAAGC ATTGCCACAG
ATACATATGG ATGAGATCGA TCTGTCCACC GATTTTTTAG GCAAATCGTT GAAGGCTCCA
TTCCTTATAG CATCTATTAC AGGCGGGCAT CCAGACACAA CTCCGGTAAA TGCCGCTCTT
GCGGAAGCTG CTGAGGAATT GGGTGTAGGG ATCGGTGTGG GAAGTCAAAG GGCTGCGATC
GAGGACCCTG AGCAGGAAAG TTCTTTTAGT GTGGTCCGTG ATAAAGCACC AAATGCATTC
GTTTATGGAA ATGTAGGTGC AGCTCAGATT AAGGAATATG GTATCGAAGC AATAGAGAAG
CTCGTTGATA TGCTGGATGC GGATGCTCTG GCAGTACATT TGAATTTCCT TCAGGAGGCA
ATACAGCCTG AAGGTGATCG AGACGCTACA GGTGTACTCG AAATGATCAA AGAGGTTTGT
TCTCTCAATG TCCCGATTAT CGCGAAGGAG ACTGGTGCTG GTATCTCTAA AGAAGATGCT
GCATTGTTGA AAGAAGCAGG TGTAAGTGCA ATTGATGTGG GTGGTGTCGG AGGTACAAGC
TGGTCAGGTG TGGAAGTATA TAGGGCACAT GATAGCGGCG ATGCAATTTC CGAGGATCTG
GGCAATCTCT ACTGGGACTT CGGTATACCT ACTGTTTCCA GTGTTCTCGA ATGCCGAAGC
TTTGTTCCCG TTGTGGCAAC GGGTGGTGTG CGAACAGGTC TCGATATTGC AAAATCCCTT
TCTCTTGGTG CGTATGCTGC AAGTGCAGCC CTTCCTTTTG TGGGGCCAGC GCTCATTGGG
GCGGATGAGG TTGTCTCAAG CCTGTCAAAG ATGCTCAATG AACTGAGGGT CGCAATGTTC
CTTTGCGGAT GTGGTAATAT TAATGAGCTT CGTACAAGTT CAAAGGTCAC TGTAACCGGA
TGGACAAAAG AATACATCAC ACAGCGTGGT TTTGATCCAA AGGACCTTGA CATAAGGTCT
GACCTTTGA
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| Protein sequence | MSTSKRKIEH LELCAKRPVE SRNVTSGFDD VMLIHKALPQ IHMDEIDLST DFLGKSLKAP
FLIASITGGH PDTTPVNAAL AEAAEELGVG IGVGSQRAAI EDPEQESSFS VVRDKAPNAF
VYGNVGAAQI KEYGIEAIEK LVDMLDADAL AVHLNFLQEA IQPEGDRDAT GVLEMIKEVC
SLNVPIIAKE TGAGISKEDA ALLKEAGVSA IDVGGVGGTS WSGVEVYRAH DSGDAISEDL
GNLYWDFGIP TVSSVLECRS FVPVVATGGV RTGLDIAKSL SLGAYAASAA LPFVGPALIG
ADEVVSSLSK MLNELRVAMF LCGCGNINEL RTSSKVTVTG WTKEYITQRG FDPKDLDIRS
DL
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