Gene Mbur_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1960 
Symbol 
ID3997862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2058096 
End bp2059598 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content49% 
IMG OID637959702 
Productthermosome subunit, group II chaperonin 
Protein accessionYP_566590 
Protein GI91773898 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02339] thermosome, various subunits, archaeal 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTGG ACTCCATGGG TGACATTGTT ATCACAAACG ATGGTGCTAC CATCTTGAAG 
GAAATGGATA TCCAGCACCC TGCAGCTAAG ATGATCGTGG AAGTATCCAA GACACAGGAT
GCTGAGGTCG GGGACGGAAC AACTACTGCA GCAGTTCTTT CAGGAGAATT GCTTTCAAAG
GCAGAAGAAC TTATCATGAA GGGAGTCCAC TCAACCATCA TATCCGAAGG TTACAGACAT
GCTGCAGAGA AATGCCGTGA GATCCTGGAA ACTATCACTA TTGCTATTTC CCCGGACGAC
GAAGCGGCTC TGATAAAGAT CGCTGGAACC GCTATCACTG GAAAGGGCGC TGAGGCATAC
AAAGAGAAGC TCTCAGCTCT CACGGTCAAA GCAGTTCGTT CAATAGTCGA AGAGGAAGAG
GATGGCCTTA AGGTCAATGT CCTTGAGAAC ATCAAGATCG AGAAGCGCGC AGGCGGAAGT
ATTGATGACT CTGAGCTTAT AGATGGTCTT GTAATTGACA AGGAACGCTC ACACCCCAAC
ATGCCTGAGA AGGTAGAGAA TGCAAAGATC CTTCTGTTAA GCTGCCCTGT GGAGTTCAGA
AAGACCGAAG TAGATTCTGA AATCAAGATC ACATCCCCGG GCCAGATGCA GTTGTTCCTG
GACCAGGAAG AGAAGATGAT GAGGGAGATG GCTGAGAAGG TCATCGCAAG CGGTGCAAAT
GTTGTATTCT GCCAGAAAGG TATCGATGAT ATGGCACAGT ACTACATCGA GAAAGCAGGT
ATCTATGCTG TCAGAAGGGT AAAGAAGAGC GATCTTAAGA GACTCAGCAA GGTAACCGGC
GCAACAATCA TACAGGACCT TGATCAGATC ACTACTGAAG ATGTAGGTAC AGCAGGTCTG
GTAGAGGAAA AAGAAGTGAG GGGCGGCAAG ATGACCTATG TTACAGGTTG CCAGAACTCC
AAGGCTGTTA CAGTACTTCT CCACGGCGGT ACCGAGCACG TTGTCGATTC ACTTGATCAT
GCATTGAACG ATGCTTTGCA TGTTGTCGGT GTTGTCATCG AAGATGGCAA GGTTGTTGTT
GGTGGCGGTT CATCTGAGGT CGAACTTTCA CTCAGACTCA GTGAGTATGC ATCCACACTC
AAGGGAAGGG AGCAGCTTGC TGTTAGCAAG TTCGCAGAAG CTCTTGAAGT GATCCCGGTG
GCACTCGCAG AGAATGCAGG TCTTGACCCA ATTGACATAA TGGTGGAACT ACGTTCCCAG
CATGAGAAGG GTAACAAGAA CGCAGGTCTT AATGTTTACA CCGGCGAGGT AGTCGACATG
TGGGAGAACG ATGTAATCGA GCCACTACGA ATAAAGACCC AGGCTATAAA CGCTGCAATG
GAAGCAACTG TCATGATCCT TAGGATCGAT GATGTCGTGG CTTCAAAAGG CAGCGCGAAC
CAAGGTATGG GTCCGGGTGG CCTGCCTGAC ATGCCTGACC TTGATATGGA CGCTGCATAC
TAA
 
Protein sequence
MLVDSMGDIV ITNDGATILK EMDIQHPAAK MIVEVSKTQD AEVGDGTTTA AVLSGELLSK 
AEELIMKGVH STIISEGYRH AAEKCREILE TITIAISPDD EAALIKIAGT AITGKGAEAY
KEKLSALTVK AVRSIVEEEE DGLKVNVLEN IKIEKRAGGS IDDSELIDGL VIDKERSHPN
MPEKVENAKI LLLSCPVEFR KTEVDSEIKI TSPGQMQLFL DQEEKMMREM AEKVIASGAN
VVFCQKGIDD MAQYYIEKAG IYAVRRVKKS DLKRLSKVTG ATIIQDLDQI TTEDVGTAGL
VEEKEVRGGK MTYVTGCQNS KAVTVLLHGG TEHVVDSLDH ALNDALHVVG VVIEDGKVVV
GGGSSEVELS LRLSEYASTL KGREQLAVSK FAEALEVIPV ALAENAGLDP IDIMVELRSQ
HEKGNKNAGL NVYTGEVVDM WENDVIEPLR IKTQAINAAM EATVMILRID DVVASKGSAN
QGMGPGGLPD MPDLDMDAAY