Gene Mbur_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1900 
Symbol 
ID3997692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1993313 
End bp1994113 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID637959643 
Productnuclease (SNase-like) 
Protein accessionYP_566532 
Protein GI91773840 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.898699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCCT CTAATCTTCA CCTCATGAAC AAACGAATTG CTTCTTTTTT GCTTCTCTTA 
TTTCTTGTTG TGTCTTCGGG GTGCGTAGGA TCGGATACTG ATGCAGCACC TCATCCTCTC
GAGTTCGTGA ATGTAACGGA AGTCATTGAC GGTGATACGA TCGTTGTGTC TTCTGGTGAA
AGGGTGCGGT TGATAGGAGT TGATACTCCT GAGGCGGGGG AGCCTTATTA TTCTGAAGCA
AAGCAATATA TGGTGCACAG GGTTCTGGGC AAGGTTATAG GTCTCGAAAA GGATGTTAGT
GAGACTGATG TATATGGAAG ACTTTTAAGG TATGTCTGGG TGGAGAATGA AATGGTTAAC
AAAGAACTTG TCCTTTCAGG ACTTGCTTTC TCAAAGGCCT ACAGTCCGGA TACGCATTAT
CAGGATATTT TCGATAGTGC GGAAGTGGTG GCAAAAAAGA ATGGTGTCGG GCTCTGGTCG
GCTCCTGTCA TGGCGGAAGA TCCTGTCACG ATCTCATATC TGGAAGCAGG GCGCTACATC
GGGCAGGTCA TTACAGTTGA AGGTACGATA GTCCAGACCA CAAAAAAGGA TGATGCTGGG
ATCATTTTCC TTAATTTTCA TGACCCTTAT GAGGGTTATT TCACTGTGGT GATCTGGAGT
GATTACTGGG ATCGTTTTTC ACAGGACCCC GTGGTCATGT ATGAGGGAAA ACATGTGTTA
GTGACCGGAA AGGTGATCGA GTACAAAGAA AATCCTGAGA TAATTGTTGA AGCACCTTCT
CAGATCGTTA TCATCCAATG A
 
Protein sequence
MFSSNLHLMN KRIASFLLLL FLVVSSGCVG SDTDAAPHPL EFVNVTEVID GDTIVVSSGE 
RVRLIGVDTP EAGEPYYSEA KQYMVHRVLG KVIGLEKDVS ETDVYGRLLR YVWVENEMVN
KELVLSGLAF SKAYSPDTHY QDIFDSAEVV AKKNGVGLWS APVMAEDPVT ISYLEAGRYI
GQVITVEGTI VQTTKKDDAG IIFLNFHDPY EGYFTVVIWS DYWDRFSQDP VVMYEGKHVL
VTGKVIEYKE NPEIIVEAPS QIVIIQ