Gene Mbur_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1888 
Symbol 
ID3997680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1983784 
End bp1984896 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content47% 
IMG OID637959632 
Productaminotransferase 
Protein accessionYP_566521 
Protein GI91773829 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCA GAGGATTTGC ACAGCGTGTT CTGGATATTG ATATTTCAGG CATTAGAAAG 
ATGTTCGAGG CTGCCGGTTC AGATGCGGTC AATCTGGGAC TTGGACAACC GGATTTTGAT
ACACCCGGCC ACATCCGACA GGCAGCCATC GATGCCATTA ATGAAGGATT TACCGGATAC
ACATACGGAG CAGGGATCGT TGAACTAAGG GAAGCATTAA GCCAGAAGTT CAGAGAACAA
AATGGTTTCG AGGTAAGTCC TGACGGTATC ATTGTTACAT CAGGTGCTTC CGAAGCGCTG
GAAATAGCTA TCGCAGCCCT CATTGATCCG GGAGATGAAA TAATAATCTC CGACCCGGGA
TTTGTATCCT ATAATGCCCT TGCAGGCTTC ATGGGTGGAA AGGTAGTTGG AGTCCCTCTG
GGAGATGATC TTACCATGCG GCCGGAAAAC GTCATGGAGA GTATCACCCC TAAAACAAAA
GCAGTCATTG TGAACTCACC TTGTAATCCT ACCGGCGGAG TGCTTTCAAA AAGCGACATC
AAAGCCTATG CTGAGATTGC AGACGATAAT GACATCACAC TTATTTCCGA TGAGGTCTAC
GAACATTTCC TTTACGAAGG AGAGCACGTC AGCCCTGCAA AGTTCACTGA CAATGTCATA
ACTGTCAATG CATTCTCAAA GACATATGCT ATGACCGGAT GGCGTGTCGG CTATACTGCT
GCGAGCCAAG AATATACCAA CCAGATGCTA AAGGTCCATC AATATGTGCA GGCATGCGCG
AACTCCATTG CGCAAAAAGC AGCCCTTGCT GCCACTACCG GCCCACAGGA CTTTGTATAT
ATGATGCGAG ATGAGTTCAA AAGCCGCAGG GATGTCCTCG TTGAAGGCGT CAATGCACTC
GGAATGGAAT GTGAAGCGCC AAAGGGTGCG TTCTACATGT TCCCGAAAGT AGAGAACAGC
ACCGAAGTTG CTACCAAGCT GGTAGCTAAC GGGGTAGTGG TTGTGCCAGG AACAGCTTTT
GGTAAAAACG GAGATGGCTA TATACGAATG TCTTATGCAA CATCCATGGA TGAAATAAAA
AGAGCTTTAA AGATAATGGA AAAAGTACTC TGA
 
Protein sequence
MSGRGFAQRV LDIDISGIRK MFEAAGSDAV NLGLGQPDFD TPGHIRQAAI DAINEGFTGY 
TYGAGIVELR EALSQKFREQ NGFEVSPDGI IVTSGASEAL EIAIAALIDP GDEIIISDPG
FVSYNALAGF MGGKVVGVPL GDDLTMRPEN VMESITPKTK AVIVNSPCNP TGGVLSKSDI
KAYAEIADDN DITLISDEVY EHFLYEGEHV SPAKFTDNVI TVNAFSKTYA MTGWRVGYTA
ASQEYTNQML KVHQYVQACA NSIAQKAALA ATTGPQDFVY MMRDEFKSRR DVLVEGVNAL
GMECEAPKGA FYMFPKVENS TEVATKLVAN GVVVVPGTAF GKNGDGYIRM SYATSMDEIK
RALKIMEKVL