| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1732 |
|---|
| Symbol | |
|---|
| ID | 3997293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1819682 |
|---|
| End bp | 1820821 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637959479 |
|---|
| Product | L-tyrosine decarboxylase |
|---|
| Protein accession | YP_566374 |
|---|
| Protein GI | 91773682 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA ACGGCAAAAC AAAAGAAGAA ATATTATTAT TTCTTAAAAA AGCCAAATCT
GCTGATGCAA GTTATGAGCG TGTTCTAAGT TCAATGTGTA CTTATCCACA TGAAATTGCA
GTTTTAGCTC ATACACAATT CATAGAATCA AACATGGGAG ATCCAGGTCT TTTCCCTGGA
ACTTTTAATC TTGAAAAACA AGTTCTTGCT ATGTTCGGGA AAATGCTACA TCACAAAAAT
TCTCCTGAAA AGGCTGGTTA TTTAACAACC GGAGGAACCG AATCTAACAT ACAGGCAATA
AGGTCAATGC ATAACTTTCG TCATGATATT TCAAGGCCTA ATATAGTAAT GCCAGAATCA
GCTCATTTTT CATTCGATAA AGTTGCAAAC TTATCAGGGA TCGAAATTAG AAAAGCTTCT
CTTGATAAAT TGCTCAAAGT TGACCTCGAT TCCGTACGGT CACTTATTGA TAAAAACACA
ATTGGTCTTG TTGGTATTGC AGGTACTACA GAATTTGGTC AGCTTGATCC TATCAATGAA
TTATCAAAGA TAGCTATTGA AAAAGGGATC TTTTTACACA TTGATGCAGC TTTTGGTGGT
TTTGTAATTC CTTTTATGGA TATTGATTAT ACCTATGATT TTAGGCTTGA AGGTGTAACT
TCAATGACAA TAGATCCTCA TAAAATGGCT TTGAGCACAA TTCCTTCAGG TGGTCTTTTA
TTCAAAGAAC CTGAATATTT TGAATGTCTT GAGATACACA CACCTTATTT AAGCGTCAAT
AAACAGTATT CATTAACAGG AACTAGAAGC GGTGCAGGAG TGGCCTCGAC TTATGCTGTC
ATGAAACATC TTGGAAGAAA AGGTTACAAA AAAGTTGTTT CAGACTGTAT GTCCGTCACA
AAAAAATTGG TTGATGGTGC AGAAAAATTG GGCATAAACA CTGTTATCGA TCCGGTTTTA
AATATTGTTG CATTGGATGT TCCTGAAGCT GATCTTGTGA GAAAAAAATT GCTTGATGAA
TATGGTTGGC ATGTATCTAT TACACGTAAT CCCCGTGCTC TTAGGATCGT TATAATGCCT
CATATTAAAA ATGAAACAAT AGAACTATTT CTGAAAGATC TTGCAAAAGT GATCAAGTGA
|
|---|
| Protein sequence | MEENGKTKEE ILLFLKKAKS ADASYERVLS SMCTYPHEIA VLAHTQFIES NMGDPGLFPG
TFNLEKQVLA MFGKMLHHKN SPEKAGYLTT GGTESNIQAI RSMHNFRHDI SRPNIVMPES
AHFSFDKVAN LSGIEIRKAS LDKLLKVDLD SVRSLIDKNT IGLVGIAGTT EFGQLDPINE
LSKIAIEKGI FLHIDAAFGG FVIPFMDIDY TYDFRLEGVT SMTIDPHKMA LSTIPSGGLL
FKEPEYFECL EIHTPYLSVN KQYSLTGTRS GAGVASTYAV MKHLGRKGYK KVVSDCMSVT
KKLVDGAEKL GINTVIDPVL NIVALDVPEA DLVRKKLLDE YGWHVSITRN PRALRIVIMP
HIKNETIELF LKDLAKVIK
|
|---|
| |