| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1717 |
|---|
| Symbol | |
|---|
| ID | 3997391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1804078 |
|---|
| End bp | 1804995 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637959463 |
|---|
| Product | ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_566359 |
|---|
| Protein GI | 91773667 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATATACA TTTTTCCAGT TATTGCAGGC AAGGACGTCA GGAAAGAATT TGGCGAGTTC
ACGGCTGTAG ACAGCGTTGC TTTTTCTGTA AATGAAGGGG AACTTTTCGG CTTTTTAGGA
CCTAATGGTG CGGGCAAGAC AACTACCATG CGTCTGATAC AGTGTATTTC CCCAATGACA
TCGGGCACGC TGGAAGTTTT TGGAATGGAT GTGAATTCTC ATCAGCGGGA GATCAAGTTC
AAGATGGGTG TTGTTCCTCA GGAGAATAAT CTGGACCCTG ATTTTACGGT CTATGAGAAC
CTCTTTGTTT TTTCGCGTTA TTTCGATATT CCTGAGGATG AAGCTAAAAA AAGAGTTGAA
GAACTTCTTA AGTTTGTGCA TCTGGAAGAA AAACGCGATA CTATGACCGA ATCGCTTTCA
GGTGGTATGA AAAGGCGTCT TGTACTTGCA AGATCCCTGA TAAACAAACC AAGGTTACTG
ATACTTGATG AGCCAACCGT GGGGCTTGAC CCCCAGTCAA GGCATCTTAT GTGGGACAAG
CTCAAAGGTC TCAAAAAGCA GGGTGTCACG ATCGTGCTCA CAACACATTA TCTTGAAGAG
GCTTCTCAAT TATGTGACAG GCTTGTTATA ATGGATAATG GGAAGATACT CGTTGAAGGC
AGCCCCACAG ATCTTATCCA GAAATACATT GGTTCTGCAA TAGTCGAGAC CGAGAACGAT
CCTGCTATTC TCTCATGCCT TGAAGGACAT AAGGCAACCT ATGAGGTGCT TGGGGATAAT
GTTCAGATAT ATACTGATAA CCTGCAGGAA ACGACCGATC ATATTCTGTC GGAGTGCAAG
TTGAAAAGTG TCACTGCACG TGCAGCGACA CTTGAAGATG TTTTCCTGAA ACTTACCGGA
AGGAAGCTCA GGGAGTGA
|
|---|
| Protein sequence | MIYIFPVIAG KDVRKEFGEF TAVDSVAFSV NEGELFGFLG PNGAGKTTTM RLIQCISPMT
SGTLEVFGMD VNSHQREIKF KMGVVPQENN LDPDFTVYEN LFVFSRYFDI PEDEAKKRVE
ELLKFVHLEE KRDTMTESLS GGMKRRLVLA RSLINKPRLL ILDEPTVGLD PQSRHLMWDK
LKGLKKQGVT IVLTTHYLEE ASQLCDRLVI MDNGKILVEG SPTDLIQKYI GSAIVETEND
PAILSCLEGH KATYEVLGDN VQIYTDNLQE TTDHILSECK LKSVTARAAT LEDVFLKLTG
RKLRE
|
|---|
| |